Summary
- Splice variants
- Transcript comparison
- Gene alleles
Sequence
- Secondary Structure
Gene families
Literature
Plant Compara
Pan-taxonomic Compara
- Gene Tree
- Orthologues
Ontologies
- GO: Anatomical entity
Phenotypes
Genetic Variation
- Variant table
- Variant image
- Structural variants
Gene expression
Pathway
Molecular interactions
Regulation
External references
Supporting evidence
ID History
- Gene history

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Ensembl Plants is produced in collaboration with Gramene

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Gene: SC37 Pp3c1_31280

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Location

Chromosome 1: 22,072,340-22,078,920 reverse strand.

About this gene

This gene has 12 transcripts (splice variants), 4 orthologues and 5 paralogues.

Transcripts

Show transcript tableHide transcript table

Name	Transcript ID	bp	Protein	Translation ID	Biotype	UniProt	Flags
SC37-203	Pp3c1_31280V3.4	3326	323aa	Pp3c1_31280V3.4	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A7I4C2H4	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical,
SC37-204	Pp3c1_31280V3.7	3314	319aa	Pp3c1_31280V3.7	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A9U070	-
SC37-209	Pp3c1_31280V3.12	2794	323aa	Pp3c1_31280V3.12	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A7I4C2H4	-
SC37-201	Pp3c1_31280V3.9	2752	289aa	Pp3c1_31280V3.9	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A7I4BTH6	-
SC37-202	Pp3c1_31280V3.8	2740	285aa	Pp3c1_31280V3.8	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A7I4BZ62	-
SC37-208	Pp3c1_31280V3.3	2715	323aa	Pp3c1_31280V3.3	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A7I4C2H4	-
SC37-207	Pp3c1_31280V3.6	2703	319aa	Pp3c1_31280V3.6	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A9U070	-
SC37-206	Pp3c1_31280V3.2	2628	313aa	Pp3c1_31280V3.2	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A7I4BTW4	-
SC37-205	Pp3c1_31280V3.1	2616	309aa	Pp3c1_31280V3.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A2K1LAF6	-
SC37-210	Pp3c1_31280V3.5	2325	319aa	Pp3c1_31280V3.5	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A9U070	-
SC37-211	Pp3c1_31280V3.10	1800	323aa	Pp3c1_31280V3.10	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A7I4C2H4	-
SC37-212	Pp3c1_31280V3.11	1788	319aa	Pp3c1_31280V3.11	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A9U070	-

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Summary

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