Summary
- Splice variants
- Transcript comparison
- Gene alleles
Sequence
- Secondary Structure
Gene families
Literature
Plant Compara
Pan-taxonomic Compara
- Gene Tree
- Orthologues
Ontologies
Phenotypes
Genetic Variation
- Variant table
- Variant image
- Structural variants
Gene expression
Pathway
Molecular interactions
Regulation
External references
Supporting evidence
ID History
- Gene history

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Ensembl Plants is produced in collaboration with Gramene

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Gene: Pp3c1_27480

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Location

Chromosome 1: 19,777,067-19,782,445 reverse strand.

About this gene

This gene has 13 transcripts (splice variants), 218 orthologues and 3 paralogues.

Transcripts

Show transcript tableHide transcript table

Name	Transcript ID	bp	Protein	Translation ID	Biotype	UniProt	Flags
-	Pp3c1_27480V3.12	2525	217aa	Pp3c1_27480V3.12	Gene/transcipt that contains an open reading frame (ORF).Protein coding	-	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical,
-	Pp3c1_27480V3.4	3072	169aa	Pp3c1_27480V3.4	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A2K1L9X9	-
-	Pp3c1_27480V3.8	3066	167aa	Pp3c1_27480V3.8	Gene/transcipt that contains an open reading frame (ORF).Protein coding	-	-
-	Pp3c1_27480V3.3	3060	169aa	Pp3c1_27480V3.3	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A2K1L9X9	-
-	Pp3c1_27480V3.7	3054	167aa	Pp3c1_27480V3.7	Gene/transcipt that contains an open reading frame (ORF).Protein coding	-	-
-	Pp3c1_27480V3.2	2961	169aa	Pp3c1_27480V3.2	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A2K1L9X9	-
-	Pp3c1_27480V3.6	2955	167aa	Pp3c1_27480V3.6	Gene/transcipt that contains an open reading frame (ORF).Protein coding	-	-
-	Pp3c1_27480V3.1	2949	169aa	Pp3c1_27480V3.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A2K1L9X9	-
-	Pp3c1_27480V3.5	2943	167aa	Pp3c1_27480V3.5	Gene/transcipt that contains an open reading frame (ORF).Protein coding	-	-
-	Pp3c1_27480V3.11	2519	215aa	Pp3c1_27480V3.11	Gene/transcipt that contains an open reading frame (ORF).Protein coding	-	-
-	Pp3c1_27480V3.10	2513	213aa	Pp3c1_27480V3.10	Gene/transcipt that contains an open reading frame (ORF).Protein coding	-	-
-	Pp3c1_27480V3.9	2507	211aa	Pp3c1_27480V3.9	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A9RQ13	-
-	Pp3c1_27480V3.13	1564	213aa	Pp3c1_27480V3.13	Gene/transcipt that contains an open reading frame (ORF).Protein coding	-	-

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Summary

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