Summary
- Splice variants
- Transcript comparison
- Gene alleles
Sequence
- Secondary Structure
Gene families
Literature
Plant Compara
- Genomic alignments
- Gene tree
- Gene gain/loss tree
- Orthologues
- Paralogues
Pan-taxonomic Compara
- Gene Tree
- Orthologues
Ontologies
- GO: Biological process
- GO: Molecular function
- GO: Cellular component
Phenotypes
Genetic Variation
- Variant table
- Variant image
- Structural variants
Gene expression
Pathway
Molecular interactions
Regulation
External references
Supporting evidence
ID History
- Gene history

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Ensembl Plants is produced in collaboration with Gramene

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Gene: Pp3c16_20090

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Location

Chromosome 16: 12,332,418-12,335,046 reverse strand.

About this gene

This gene has 13 transcripts (splice variants) and 5 paralogues.

Transcripts

Show transcript tableHide transcript table

Name	Transcript ID	bp	Protein	Translation ID	Biotype	UniProt	Flags
-	Pp3c16_20090V3.10	1534	182aa	Pp3c16_20090V3.10	Gene/transcipt that contains an open reading frame (ORF).Protein coding	-	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical,
-	Pp3c16_20090V3.5	1860	141aa	Pp3c16_20090V3.5	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A2K1J9E8	-
-	Pp3c16_20090V3.4	1855	141aa	Pp3c16_20090V3.4	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A2K1J9E8	-
-	Pp3c16_20090V3.3	1775	141aa	Pp3c16_20090V3.3	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A2K1J9E8	-
-	Pp3c16_20090V3.2	1770	141aa	Pp3c16_20090V3.2	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A2K1J9E8	-
-	Pp3c16_20090V3.8	1724	163aa	Pp3c16_20090V3.8	Gene/transcipt that contains an open reading frame (ORF).Protein coding	-	-
-	Pp3c16_20090V3.7	1619	163aa	Pp3c16_20090V3.7	Gene/transcipt that contains an open reading frame (ORF).Protein coding	-	-
-	Pp3c16_20090V3.6	1611	163aa	Pp3c16_20090V3.6	Gene/transcipt that contains an open reading frame (ORF).Protein coding	-	-
-	Pp3c16_20090V3.9	1526	182aa	Pp3c16_20090V3.9	Gene/transcipt that contains an open reading frame (ORF).Protein coding	-	-
-	Pp3c16_20090V3.1	1385	141aa	Pp3c16_20090V3.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A2K1J9E8	-
-	Pp3c16_20090V3.11	1132	182aa	Pp3c16_20090V3.11	Gene/transcipt that contains an open reading frame (ORF).Protein coding	-	-
-	Pp3c16_20090V3.13	1078	141aa	Pp3c16_20090V3.13	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A2K1J9E8 A9TUQ3	-
-	Pp3c16_20090V3.12	1073	141aa	Pp3c16_20090V3.12	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A2K1J9E8	-

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Summary

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