Summary
- Splice variants
- Transcript comparison
- Gene alleles
Sequence
- Secondary Structure
Gene families
Literature
Plant Compara
Pan-taxonomic Compara
- Gene Tree
- Orthologues
Ontologies
- GO: Molecular function
- GO: Cellular component
- GO: Biological process
Phenotypes
Genetic Variation
- Variant table
- Variant image
- Structural variants
Gene expression
Pathway
Molecular interactions
Regulation
External references
Supporting evidence
ID History
- Gene history

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Ensembl Plants is produced in collaboration with Gramene

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Gene: Pp3c12_15420

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Location

Chromosome 12: 10,296,432-10,309,213 forward strand.

About this gene

This gene has 15 transcripts (splice variants), 165 orthologues and 2 paralogues.

Transcripts

Show transcript tableHide transcript table

Name	Transcript ID	bp	Protein	Translation ID	Biotype	UniProt	Flags
-	Pp3c12_15420V3.5	5304	1073aa	Pp3c12_15420V3.5	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A9SEB6	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical,
-	Pp3c12_15420V3.3	5271	1062aa	Pp3c12_15420V3.3	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A2K1JQY3	-
-	Pp3c12_15420V3.4	4933	1073aa	Pp3c12_15420V3.4	Gene/transcipt that contains an open reading frame (ORF).Protein coding	-	-
-	Pp3c12_15420V3.2	4900	1062aa	Pp3c12_15420V3.2	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A2K1JQY3	-
-	Pp3c12_15420V3.7	4042	1073aa	Pp3c12_15420V3.7	Gene/transcipt that contains an open reading frame (ORF).Protein coding	-	-
-	Pp3c12_15420V3.6	4009	1062aa	Pp3c12_15420V3.6	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A2K1JQY3	-
-	Pp3c12_15420V3.1	3845	1062aa	Pp3c12_15420V3.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A2K1JQY3	-
-	Pp3c12_15420V3.11	3291	860aa	Pp3c12_15420V3.11	Gene/transcipt that contains an open reading frame (ORF).Protein coding	-	-
-	Pp3c12_15420V3.9	3258	849aa	Pp3c12_15420V3.9	Gene/transcipt that contains an open reading frame (ORF).Protein coding	-	-
-	Pp3c12_15420V3.15	3093	860aa	Pp3c12_15420V3.15	Gene/transcipt that contains an open reading frame (ORF).Protein coding	-	-
-	Pp3c12_15420V3.14	3060	849aa	Pp3c12_15420V3.14	Gene/transcipt that contains an open reading frame (ORF).Protein coding	-	-
-	Pp3c12_15420V3.13	3031	938aa	Pp3c12_15420V3.13	Gene/transcipt that contains an open reading frame (ORF).Protein coding	-	-
-	Pp3c12_15420V3.12	2998	927aa	Pp3c12_15420V3.12	Gene/transcipt that contains an open reading frame (ORF).Protein coding	-	-
-	Pp3c12_15420V3.10	2936	860aa	Pp3c12_15420V3.10	Gene/transcipt that contains an open reading frame (ORF).Protein coding	-	-
-	Pp3c12_15420V3.8	2903	849aa	Pp3c12_15420V3.8	Gene/transcipt that contains an open reading frame (ORF).Protein coding	-	-

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Summary

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