Summary
- Splice variants
- Transcript comparison
- Gene alleles
Sequence
- Secondary Structure
Gene families
Literature
Plant Compara
Pan-taxonomic Compara
- Gene Tree
- Orthologues
Ontologies
- GO: Cellular component
- GO: Molecular function
- GO: Biological process
Phenotypes
Genetic Variation
- Variant table
- Variant image
- Structural variants
Gene expression
Pathway
Molecular interactions
Regulation
External references
Supporting evidence
ID History
- Gene history

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Ensembl Plants is produced in collaboration with Gramene

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Gene: Pp3c18_11800

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Location

Chromosome 18: 8,583,888-8,588,836 reverse strand.

About this gene

This gene has 15 transcripts (splice variants), 74 orthologues and 3 paralogues.

Transcripts

Show transcript tableHide transcript table

Name	Transcript ID	bp	Protein	Translation ID	Biotype	UniProt	Flags
-	Pp3c18_11800V3.15	1917	460aa	Pp3c18_11800V3.15	Gene/transcipt that contains an open reading frame (ORF).Protein coding	-	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical,
-	Pp3c18_11800V3.1	2941	379aa	Pp3c18_11800V3.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A2K1J0Q9	-
-	Pp3c18_11800V3.14	2681	379aa	Pp3c18_11800V3.14	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A2K1J0Q9	-
-	Pp3c18_11800V3.7	2670	379aa	Pp3c18_11800V3.7	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A2K1J0Q9	-
-	Pp3c18_11800V3.6	2631	379aa	Pp3c18_11800V3.6	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A2K1J0Q9	-
-	Pp3c18_11800V3.10	2591	349aa	Pp3c18_11800V3.10	Gene/transcipt that contains an open reading frame (ORF).Protein coding	-	-
-	Pp3c18_11800V3.4	2580	349aa	Pp3c18_11800V3.4	Gene/transcipt that contains an open reading frame (ORF).Protein coding	-	-
-	Pp3c18_11800V3.3	2542	349aa	Pp3c18_11800V3.3	Gene/transcipt that contains an open reading frame (ORF).Protein coding	-	-
-	Pp3c18_11800V3.13	2500	379aa	Pp3c18_11800V3.13	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A2K1J0Q9	-
-	Pp3c18_11800V3.5	2435	379aa	Pp3c18_11800V3.5	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A2K1J0Q9	-
-	Pp3c18_11800V3.2	2199	349aa	Pp3c18_11800V3.2	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A9RE30	-
-	Pp3c18_11800V3.12	2115	379aa	Pp3c18_11800V3.12	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A2K1J0Q9	-
-	Pp3c18_11800V3.9	2025	349aa	Pp3c18_11800V3.9	Gene/transcipt that contains an open reading frame (ORF).Protein coding	-	-
-	Pp3c18_11800V3.11	1737	379aa	Pp3c18_11800V3.11	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A2K1J0Q9	-
-	Pp3c18_11800V3.8	1647	349aa	Pp3c18_11800V3.8	Gene/transcipt that contains an open reading frame (ORF).Protein coding	-	-

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Summary

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