Summary
- Splice variants
- Transcript comparison
- Gene alleles
Sequence
- Secondary Structure
Gene families
Literature
Plant Compara
Pan-taxonomic Compara
- Gene Tree
- Orthologues
Ontologies
- GO: Molecular function
- GO: Cellular component
- GO: Biological process
Phenotypes
Genetic Variation
- Variant table
- Variant image
- Structural variants
Gene expression
Pathway
Molecular interactions
Regulation
External references
Supporting evidence
ID History
- Gene history

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Ensembl Plants is produced in collaboration with Gramene

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Gene: Pp3c17_13520

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Location

Chromosome 17: 9,457,666-9,464,663 reverse strand.

About this gene

This gene has 12 transcripts (splice variants), 9 orthologues and 105 paralogues.

Transcripts

Show transcript tableHide transcript table

Name	Transcript ID	bp	Protein	Translation ID	Biotype	UniProt	Flags
-	Pp3c17_13520V3.7	4083	1184aa	Pp3c17_13520V3.7	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A2K1J3R4	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical,
-	Pp3c17_13520V3.4	4100	1175aa	Pp3c17_13520V3.4	Gene/transcipt that contains an open reading frame (ORF).Protein coding	-	-
-	Pp3c17_13520V3.6	4028	1151aa	Pp3c17_13520V3.6	Gene/transcipt that contains an open reading frame (ORF).Protein coding	-	-
-	Pp3c17_13520V3.5	4011	1160aa	Pp3c17_13520V3.5	Gene/transcipt that contains an open reading frame (ORF).Protein coding	-	-
-	Pp3c17_13520V3.1	3971	1184aa	Pp3c17_13520V3.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A2K1J3R4	-
-	Pp3c17_13520V3.2	3959	1128aa	Pp3c17_13520V3.2	Gene/transcipt that contains an open reading frame (ORF).Protein coding	-	-
-	Pp3c17_13520V3.3	3942	1137aa	Pp3c17_13520V3.3	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A9SNP2	-
-	Pp3c17_13520V3.11	3871	1032aa	Pp3c17_13520V3.11	Gene/transcipt that contains an open reading frame (ORF).Protein coding	-	-
-	Pp3c17_13520V3.10	3827	1032aa	Pp3c17_13520V3.10	Gene/transcipt that contains an open reading frame (ORF).Protein coding	-	-
-	Pp3c17_13520V3.9	3730	985aa	Pp3c17_13520V3.9	Gene/transcipt that contains an open reading frame (ORF).Protein coding	-	-
-	Pp3c17_13520V3.8	3686	985aa	Pp3c17_13520V3.8	Gene/transcipt that contains an open reading frame (ORF).Protein coding	-	-
-	Pp3c17_13520V3.12	3207	943aa	Pp3c17_13520V3.12	Gene/transcipt that contains an open reading frame (ORF).Protein coding	-	-

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Summary

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