Summary
- Splice variants
- Transcript comparison
- Gene alleles
Sequence
- Secondary Structure
Gene families
Literature
Plant Compara
- Genomic alignments
- Gene tree
- Gene gain/loss tree
- Orthologues
- Paralogues
Pan-taxonomic Compara
- Gene Tree
- Orthologues
Ontologies
- GO: Anatomical entity
Phenotypes
Genetic Variation
- Variant table
- Variant image
- Structural variants
Gene expression
Pathway
Molecular interactions
Regulation
External references
Supporting evidence
ID History
- Gene history

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Ensembl Plants is produced in collaboration with Gramene

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Gene: Pp3c16_5480

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Location

Chromosome 16: 3,679,943-3,683,417 forward strand.

About this gene

This gene has 4 transcripts (splice variants) and 1 orthologue.

Transcripts

Show transcript tableHide transcript table

Name	Transcript ID	bp	Protein	Translation ID	Biotype	UniProt	Flags
-	Pp3c16_5480V3.4	2124	220aa	Pp3c16_5480V3.4	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A9RLH1	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical,
-	Pp3c16_5480V3.3	2091	220aa	Pp3c16_5480V3.3	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A9RLH1	-
-	Pp3c16_5480V3.2	1900	220aa	Pp3c16_5480V3.2	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A9RLH1	-
-	Pp3c16_5480V3.1	1862	220aa	Pp3c16_5480V3.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A9RLH1	-

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Summary

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