Summary
Sequence
Protein Information
- Protein summary
- Domains & features
- Variants
- PDB 3D protein model
- AlphaFold predicted model
Genetic Variation
- Variant table
- Variant image
- Population comparison
- Comparison image
External References
- General identifiers
- Oligo probes
Supporting evidence
ID History
- Transcript history
- Protein history

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Ensembl Plants is produced in collaboration with Gramene

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Transcript: ABO99689

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Description

predicted protein

Location

Chromosome 14: 131,841-133,895 reverse strand.

About this transcript

This transcript has 1 exon and is annotated with 20 domains and features.

Gene

This transcript is a product of gene OSTLU_89076 Show transcript tableHide transcript table

Name	Transcript ID	bp	Protein	Biotype	UniProt	Flags
-	ABO99689	2055	684aa	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A4S756	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical,

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Domains & features

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Domains

Original project that identified the domainDomain source	Start	End	Description	Accession	InterPro
Pfam	15	370	-	PF23098	-
Pfam	373	421	-	PF23097	-
Pfam	492	519	NUC153	PF08159	IPR012580 [Display all genes with this domain]
PANTHER	10	653	Nucleolar protein 10/Enp2	PTHR14927	IPR040382 [Display all genes with this domain]
SMART	173	212	WD40 repeat	SM00320	IPR001680 [Display all genes with this domain]
SMART	218	258	WD40 repeat	SM00320	IPR001680 [Display all genes with this domain]
PROSITE profiles	226	267	WD40 repeat	PS50082	IPR001680 [Display all genes with this domain]
SMART	261	303	WD40 repeat	SM00320	IPR001680 [Display all genes with this domain]
Superfamily	66	328	WD40-repeat-containing domain superfamily	SSF50978	IPR036322 [Display all genes with this domain]
Gene3D	110	346	WD40/YVTN repeat-like-containing domain superfamily	2.130.10.10	IPR015943 [Display all genes with this domain]

Other features

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Feature type
Start
End

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Feature type	Start	End
MobiDBLite	537	561
MobiDBLite	539	557
MobiDBLite	574	599
MobiDBLite	574	684
Seg	358	373
Seg	429	440
Seg	468	483
Seg	541	557
Seg	673	684
Alphafold	1	684

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