Summary
Sequence
Protein Information
- Protein summary
- Domains & features
- Variants
- PDB 3D protein model
- AlphaFold predicted model
Genetic Variation
- Variant table
- Variant image
- Population comparison
- Comparison image
External References
- General identifiers
- Oligo probes
Supporting evidence
ID History
- Transcript history
- Protein history

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Ensembl Plants is produced in collaboration with Gramene

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Transcript: ABO99863

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Description

predicted protein

Location

Chromosome 15: 93,920-94,153 forward strand.

About this transcript

This transcript has 1 exon and is annotated with 13 domains and features.

Gene

This transcript is a product of gene OSTLU_40601 Show transcript tableHide transcript table

Name	Transcript ID	bp	Protein	Biotype	UniProt	Flags
-	ABO99863	234	77aa	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A4S861	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical,

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Domains & features

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Domains

Original project that identified the domainDomain source	Start	End	Description	Accession	InterPro
Gene3D	1	77	-	3.10.20.90	-
CDD	2	75	Nedd8-like ubiquitin	cd01806	IPR038738 [Display all genes with this domain]
PANTHER	2	75	Ubiquitin and ubiquitin-like	PTHR10666	IPR050158 [Display all genes with this domain]
PROSITE patterns	26	51	Ubiquitin conserved site	PS00299	IPR019954 [Display all genes with this domain]
Prints	10	30	Ubiquitin domain	PR00348	IPR019956 [Display all genes with this domain]
Prints	31	51	Ubiquitin domain	PR00348	IPR019956 [Display all genes with this domain]
Prints	52	73	Ubiquitin domain	PR00348	IPR019956 [Display all genes with this domain]
SMART	1	71	Ubiquitin-like domain	SM00213	IPR000626 [Display all genes with this domain]
PROSITE profiles	1	75	Ubiquitin-like domain	PS50053	IPR000626 [Display all genes with this domain]
Pfam	2	72	Ubiquitin-like domain	PF00240	IPR000626 [Display all genes with this domain]
Superfamily	2	76	Ubiquitin-like domain superfamily	SSF54236	IPR029071 [Display all genes with this domain]

Other features

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Feature type
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Filter

Feature type	Start	End
Seg	22	35
Alphafold	1	77

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