Summary
Sequence
Protein Information
- Protein summary
- Domains & features
- Variants
- PDB 3D protein model
- AlphaFold predicted model
Genetic Variation
External References
- General identifiers
- Oligo probes
Supporting evidence
ID History
- Transcript history
- Protein history

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Ensembl Plants is produced in collaboration with Gramene

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Transcript: Os05t0530500-02 SNRK1A-201

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Location

Chromosome 5: 26,347,148-26,351,599 reverse strand.

About this transcript

This transcript has 11 exons, is annotated with 22 domains and features and is associated with 104 variant alleles.

Gene

This transcript is a product of gene Os05g0530500 Show transcript tableHide transcript table

Name	Transcript ID	bp	Protein	Biotype	UniProt	RefSeq	Flags
SNRK1A-201	Os05t0530500-02	2072	505aa	Gene/transcipt that contains an open reading frame (ORF).Protein coding	Q852Q2	-	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical,
SNRK1A-202	Os05t0530500-03	1197	280aa	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A0P0WPR2	-	-
SNRK1A-203	Os05t0530500-01	1187	331aa	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A0P0WPP6	-	-

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Variant table

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Variant table

This table shows known variants for this transcript. Use the 'Consequence Type' filter to view a subset of these.

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Variant ID	Chr: bp	Alleles	Class	Source	Evidence	Clin. Sig.	Conseq. Type	AA	AA coord	SIFT

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