Summary
Sequence
Protein Information
- Protein summary
- Domains & features
- Variants
- PDB 3D protein model
- AlphaFold predicted model
Genetic Variation
External References
- General identifiers
- Oligo probes
Supporting evidence
ID History
- Transcript history
- Protein history

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Ensembl Plants is produced in collaboration with Gramene

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Transcript: Os10t0190000-01 OsUBC4-201

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Location

Chromosome 10: 6,244,562-6,250,840 forward strand.

About this transcript

This transcript has 6 exons, is annotated with 8 domains and features, is associated with 254 variant alleles and maps to 57 oligo probes.

Gene

This transcript is a product of gene Os10g0190000 Show transcript tableHide transcript table

Name	Transcript ID	bp	Protein	Biotype	UniProt	Flags
OsUBC4-202	Os10t0190000-02	940	184aa	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A0P0XT60	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical,
OsUBC4-201	Os10t0190000-01	2812	150aa	Gene/transcipt that contains an open reading frame (ORF).Protein coding	Q0IYM8 Q33AD8	-

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General identifiers

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This transcript corresponds to the following database identifiers:

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External database	Database identifier
European Nucleotide Archive	AK064839 [align] [view all locations] AP008216 [align] [view all locations] AP014966 [align] [view all locations] DP000086 [align] [view all locations]
INSDC protein ID	ABB46988.1 [align] [view all locations] BAF26187.1 [align] [view all locations] BAG89234.1 [align] [view all locations] BAT10183.1 [align] [view all locations]
Integrated Rice Science Database transcript name	OsUBC4-201 [view all locations]
UniParc	UPI00005E1C65 [view all locations]
UniProtKB/TrEMBL	Q0IYM8.12 [Target %id: 100; Query %id: 100] [align] Os10g0190000 protein [view all locations] Q33AD8.139 [Target %id: 100; Query %id: 100] [align] Os10g0190000 protein; Ubiquitin-conjugating enzyme E2 M, putative, expressed; cDNA clone:J013000F24, full insert sequence [view all locations]

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