Summary
Sequence
Protein Information
- Protein summary
- Domains & features
- Variants
- PDB 3D protein model
- AlphaFold predicted model
Genetic Variation
External References
- General identifiers
- Oligo probes
Supporting evidence
ID History
- Transcript history
- Protein history

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Ensembl Plants is produced in collaboration with Gramene

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Transcript: Os07t0602200-01

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Location

Chromosome 7: 24,592,035-24,598,353 forward strand.

About this transcript

This transcript has 13 exons, is annotated with 5 domains and features, is associated with 199 variant alleles and maps to 56 oligo probes.

Gene

This transcript is a product of gene Os07g0602200 Show transcript tableHide transcript table

Name	Transcript ID	bp	Protein	Biotype	UniProt	Flags
-	Os07t0602200-01	2597	695aa	Gene/transcipt that contains an open reading frame (ORF).Protein coding	B9FYA4 Q0D4V4	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical,

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General identifiers

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This transcript corresponds to the following database identifiers:

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External database	Database identifier
European Nucleotide Archive	AP008213 [align] [view all locations] AP014963 [align] [view all locations] CM000144 [align] [view all locations]
INSDC protein ID	BAF22119.1 [align] [view all locations] BAT02529.1 [align] [view all locations] EEE67541.1 [align] [view all locations]
RefSeq mRNA predicted	XM_015792187.2 [Target %id: 100; Query %id: 98] [align] PREDICTED: Oryza sativa Japonica Group histone deacetylase 5 (LOC4343829), transcript variant X1, mRNA. [view all locations]
UniParc	UPI0000E12BDB [view all locations]
UniProtKB/TrEMBL	B9FYA4.22 [Target %id: 100; Query %id: 100] [align] Os07g0602200 protein [view all locations] Q0D4V4.126 [Target %id: 100; Query %id: 100] [align] Os07g0602200 protein [view all locations]

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