Oryza sativa Japonica Group (IRGSP-1.0)
Location
About this transcript

This transcript has 2 exons, is annotated with 2 domains and features, is associated with 26 variant alleles and maps to 19 oligo probes.

Gene
Show/hide columns (1 hidden)
  • Name
  • Transcript ID
  • bp
  • Protein
  • Translation ID
  • Biotype
  • UniProt
  • Flags
NameTranscript IDbpProteinBiotypeUniProtFlags
OsWD40-171-201Os09t0363600-011542279aa
 
Protein coding
Q0J2A8 Q6K4E0 Ensembl Canonical
OsWD40-171-202Os09t0363600-0241270aa
 
Protein coding
A0A0P0XM00 -
Codons
  • Alternating codons
  • Alternating codons
Exons
  • An exon
  • Another exon
Variants
  • loading
Other
  • UTR
Markup
  • loading
                                                                          
     1 ATCTTAGCAGTCGGTGCTGAACCTCTGCTCTCTCGTTTCTCTATCAATGGGACTCTTCTT     60
     1 ATCTTAGCAGTCGGTGCTGAACCTCTGCTCTCTCGTTTCTCTATCAATGGGACTCTTCTT     60
     1 -I--L--A--V--G--A--E--P--L--L--S--R--F--S--I--N--G--T--L--L-     20

                                                                          
    61 TCACAAATCAAGTGTGCTCCTCACTCAGCATTTTCTGTCTCCATACATTCTTCAGGGATG    120
    61 TCACAAATCAAGTGTGCTCCTCACTCAGCATTTTCTGTCTCCATACATTCTTCAGGGATG    120
    21 -S--Q--I--K--C--A--P--H--S--A--F--S--V--S--I--H--S--S--G--M-     40

                                                                          
   121 GCAGCTGTTGCTGGATATGGAGGCCTTGTGGATGTAATATCACAATTTGGGAGTCATTTG    180
   121 GCAGCTGTTGCTGGATATGGAGGCCTTGTGGATGTAATATCACAATTTGGGAGTCATTTG    180
    41 -A--A--V--A--G--Y--G--G--L--V--D--V--I--S--Q--F--G--S--H--L-     60

                                                                          
   181 TGCACTTTTGGCTGCCGGAGCCTGGATAAGTAAGATCTATTGGAACAATTAGCTAAGCAC    240
   181 TGCACTTTTGGCTGCCGGAGCCTGGATAAGTAA...........................    213
    61 -C--T--F--G--C--R--S--L--D--K--*-...........................     70

                                                                          
   241 TCTTAATAGTGTAAAGAACTGGAAAAACACTGCCAAGATCTAATTAAGTACTACTACTAG    300
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   301 TAATCATACACTTGGGAGCTGTTCAGCTGTAACACTAGTTCATCTCTGTGCTAACTTATG    360
       ............................................................       
       ............................................................       

                                                                          
   361 TAATTCACAGTTGTGCCGTTGCTGCTCCGATAGAGATGACTCTAGATCCCTT            412
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