Oryza sativa Japonica Group (IRGSP-1.0)
Location
About this transcript

This transcript has 7 exons, is annotated with 8 domains and features and is associated with 305 variant alleles.

Gene
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  • Name
  • Transcript ID
  • bp
  • Protein
  • Translation ID
  • Biotype
  • UniProt
  • Flags
NameTranscript IDbpProteinBiotypeUniProtFlags
-Os06t0731100-001099121aa
 
Protein coding
A0A0P0X1A3 Ensembl Canonical
Codons
  • Alternating codons
  • Alternating codons
Exons
  • An exon
  • Another exon
Variants
  • loading
Other
  • UTR
Markup
  • loading
                                                                          
     1 ATGTCAAATGGTGTTTCATTACATGAACTGTCAGTTTCACTTTCAAAAGGTCGAAATATG     60
     1 ATGTCAAATGGTGTTTCATTACATGAACTGTCAGTTTCACTTTCAAAAGGTCGAAATATG     60
     1 -M--S--N--G--V--S--L--H--E--L--S--V--S--L--S--K--G--R--N--M-     20

                                                                          
    61 TCAAACAGACAAAGTGATGACTTGTGCAGCATTTGTTCAGATGGTGGGGAGCTTCTCCTT    120
    61 TCAAACAGACAAAGTGATGACTTGTGCAGCATTTGTTCAGATGGTGGGGAGCTTCTCCTT    120
    21 -S--N--R--Q--S--D--D--L--C--S--I--C--S--D--G--G--E--L--L--L-     40

                                                                          
   121 TGTGATTCCTGCCCAAGAGCTTTTCACAGAGAGTGTGTTGGCTTTACTACTATCCCAAGG    180
   121 TGTGATTCCTGCCCAAGAGCTTTTCACAGAGAGTGTGTTGGCTTTACTACTATCCCAAGG    180
    41 -C--D--S--C--P--R--A--F--H--R--E--C--V--G--F--T--T--I--P--R-     60

                                                                          
   181 GGAACTTGGTGTTGTCGGTATTGTGAGAATAGACAACAGAGAGAAAGTTCTTTGGCATAT    240
   181 GGAACTTGGTGTTGTCGGTATTGTGAGAATAGACAACAGAGAGAAAGTTCTTTGGCATAT    240
    61 -G--T--W--C--C--R--Y--C--E--N--R--Q--Q--R--E--S--S--L--A--Y-     80

                                                                          
   241 AACCACAATGCAATAGCTGCTGGGAGGATTGACGGAATTGATCCAATGGAACAAATATTT    300
   241 AACCACAATGCAATAGCTGCTGGGAGGATTGACGGAATTGATCCAATGGAACAAATATTT    300
    81 -N--H--N--A--I--A--A--G--R--I--D--G--I--D--P--M--E--Q--I--F-    100

                                                                          
   301 ACAAGGTCCATACGCATTGCCACAACACCAGTGACTGGATTTGGTGGCTGTGCACTGTGC    360
   301 ACAAGGTCCATACGCATTGCCACAACACCAGTGACTGGATTTGGTGGCTGTGCACTGTGC    360
   101 -T--R--S--I--R--I--A--T--T--P--V--T--G--F--G--G--C--A--L--C-    120

                                                                          
   361 AGGTAAGTTCATCCATTGGAACACAATATGGCTGATTTGACGGTGATATTCCTTGCCTGA    420
   361 AGGTAA......................................................    366
   121 -R--*-......................................................    121

                                                                          
   421 TATATATCAATAAGTTTTCAGCATAAACCAAGATCGATATTAATATGGGCTGTTGCAGGC    480
       ............................................................       
       ............................................................       

                                                                          
   481 CTTGCCTGAGGGAGCATGGTATTGTACTGCGGACTGCGTTAGGATCAGCGAGACACTGAA    540
       ............................................................       
       ............................................................       

                                                                          
   541 GGACTTACTTAGCCGTGGAGCAGAGCCTATTTCTTCTGTAGATGTAGAAATTATAAAGAG    600
       ............................................................       
       ............................................................       

                                                                          
   601 GAAATATGAACAGAAAGCTCTAAATAAAGATGGAGATCTTGATGTTAGATGGAGGGTTTT    660
       ............................................................       
       ............................................................       

                                                                          
   661 GAAGGACAAAAGTTCAGCAGACAGTAAATTGGTTCTCTCCAAAGCAGTTGCAATTTTCCA    720
       ............................................................       
       ............................................................       

                                                                          
   721 TGAATCATTTGATCCCATTATCCAAATTGCTACTGGGCGAGACCTTATTCCAGCCATGGT    780
       ............................................................       
       ............................................................       

                                                                          
   781 TTACGGGTATGATGGACTACTGAGGAGTGTAAGGGATCAAGATTACACAGGAATGCATTG    840
       ............................................................       
       ............................................................       

                                                                          
   841 TGCTGTATTAACTGTTGGGTAAACTTCTATATCTGCGGGTCTTTTCCGTGTTATGGGTAG    900
       ............................................................       
       ............................................................       

                                                                          
   901 TGAAATTGCGGAGCTACCCTTGGTTGCTACAAGTAGAGATAGTCAAGGCTTGGGGTATTT    960
       ............................................................       
       ............................................................       

                                                                          
   961 CCAAGCGCTGTTTGGCTGCATAGAACGATTGTTGGCATCTCTGAAGGTGAAACATTTTGT   1020
       ............................................................       
       ............................................................       

                                                                          
  1021 GCTGCCAGCTGCAGATGAAGCGGAGTCTATCTGGACACAGCGGTTTGGATTCGTGAAGAT   1080
       ............................................................       
       ............................................................       

                                                                          
  1081 AACCCAAGACGAGGTTGAA                                            1099
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