Oryza sativa Japonica Group (IRGSP-1.0) ▼ 
Summary
SequenceProtein InformationProtein summaryDomains & featuresVariantsPDB 3D protein modelAlphaFold predicted modelGenetic VariationExternal ReferencesGeneral identifiersOligo probesSupporting evidenceID History.
Chromosome 6: 5,036,134-5,039,206 reverse strand.
This transcript has 2 exons, is annotated with 5 domains and features and is associated with 92 variant alleles.
This transcript is a product of gene Os06g0199200 Show transcript tableHide transcript table
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1 GTATTAGACCATCTTTTGAGAGTAGCGCTGTCTCAGATGTAAGTAAGGCAGATCTTAGGG 60 ..ATTAGACCATCTTTTGAGAGTAGCGCTGTCTCAGATGTAAGTAAGGCAGATCTTAGGG 58 ..-I--R--P--S--F--E--S--S--A--V--S--D--V--S--K--A--D--L--R-- 19 61 CTTCTGGGAAAACTATCCTAGATAGGTCCGAGTCATCAAAGTCAAATAACTCGGATGATG 120 59 CTTCTGGGAAAACTATCCTAGATAGGTCCGAGTCATCAAAGTCAAATAACTCGGATGATG 118 20 A--S--G--K--T--I--L--D--R--S--E--S--S--K--S--N--N--S--D--D-- 39 121 AGGCACACCAGTTTTGGCGTAAGCAGCTTCCTGATGACATTATTCCAGACTTCAGTTTTG 180 119 AGGCACACCAGTTTTGGCGTAAGCAGCTTCCTGATGACATTATTCCAGACTTCAGTTTTG 178 40 E--A--H--Q--F--W--R--K--Q--L--P--D--D--I--I--P--D--F--S--F-- 59 181 AGAAAATTGAACAAGAACCTGAAGAATTGTCTCTTGCTGGATTATCCTTGAATGCACCCC 240 179 AGAAAATTGAACAAGAACCTGAAGAATTGTCTCTTGCTGGATTATCCTTGAATGCACCCC 238 60 E--K--I--E--Q--E--P--E--E--L--S--L--A--G--L--S--L--N--A--P-- 79 241 CTTTCTATGGAACAACAGCTAGCCGCTTTTCAAGAGAGCATGATTTATCTTCTCAAGCTA 300 239 CTTTCTATGGAACAACAGCTAGCCGCTTTTCAAGAGAGCATGATTTATCTTCTCAAGCTA 298 80 P--F--Y--G--T--T--A--S--R--F--S--R--E--H--D--L--S--S--Q--A-- 99 301 ACAAGAGCCTGGAACTGGGGCTTACCAGTTTACTTTATGAAGATAATTCACAAGCATCGT 360 299 ACAAGAGCCTGGAACTGGGGCTTACCAGTTTACTTTATGAAGATAATTCACAAGCATCGT 358 100 N--K--S--L--E--L--G--L--T--S--L--L--Y--E--D--N--S--Q--A--S-- 119 361 TTCCAACTATGGGTTCAAGCAATTGGGAGCAAAATTTTGTAGGGGATCTCCATTTTACGA 420 359 TTCCAACTATGGGTTCAAGCAATTGGGAGCAAAATTTTGTAGGGGATCTCCATTTTACGA 418 120 F--P--T--M--G--S--S--N--W--E--Q--N--F--V--G--D--L--H--F--T-- 139 421 ATGGAAATCAGGGCCTTCATTATGATTCTGAAAGTGCTGCAGGCTTTTCTGACAGTTTTG 480 419 ATGGAAATCAGGGCCTTCATTATGATTCTGAAAGTGCTGCAGGCTTTTCTGACAGTTTTG 478 140 N--G--N--Q--G--L--H--Y--D--S--E--S--A--A--G--F--S--D--S--F-- 159 481 CTAGCGATTATGCTGCAGCAACAGACGATGTTCTTGACCCCCTAGCGTATTTAGCTTCAC 540 479 CTAGCGATTATGCTGCAGCAACAGACGATGTTCTTGACCCCCTAGCGTATTTAGCTTCAC 538 160 A--S--D--Y--A--A--A--T--D--D--V--L--D--P--L--A--Y--L--A--S-- 179 541 AGTTTCCTGATTTTTCATCAGAGAGCCTTGCAGAGCTGTACTATGCTAATGGATGTGACT 600 539 AGTTTCCTGATTTTTCATCAGAGAGCCTTGCAGAGCTGTACTATGCTAATGGATGTGACT 598 180 Q--F--P--D--F--S--S--E--S--L--A--E--L--Y--Y--A--N--G--C--D-- 199 601 TCAACCATACTATTGAAATCCTCACCCAGCTAGAGATGCAAGTTGATGCTACCTCCAATC 660 599 TCAACCATACTATTGAAATCCTCACCCAGCTAGAGATGCAAGTTGATGCTACCTCCAATC 658 200 F--N--H--T--I--E--I--L--T--Q--L--E--M--Q--V--D--A--T--S--N-- 219 661 CAACTCTGACCCCCAGGACACCAAACTTTAGCACAGGGGACTTCCCCGCACTGCCAACAG 720 659 CAACTCTGACCCCCAGGACACCAAACTTTAGCACAGGGGACTTCCCCGCACTGCCAACAG 718 220 P--T--L--T--P--R--T--P--N--F--S--T--G--D--F--P--A--L--P--T-- 239 721 TTGAAGACCAAAATGGTTTTTCCAAAGGCAATGCAGATATTCTAAGCATCTTCAATGGAC 780 719 TTGAAGACCAAAATGGTTTTTCCAAAGGCAATGCAGATATTCTAAGCATCTTCAATGGAC 778 240 V--E--D--Q--N--G--F--S--K--G--N--A--D--I--L--S--I--F--N--G-- 259 781 GCAGCTCACCCTCTGTATCTACTGGTACTGGTGATTTTGTTTCAGCTGTTCGCAAACTTG 840 779 GCAGCTCACCCTCTGTATCTACTGGTACTGGTGATTTTGTTTCAGCTGTTCGCAAACTTG 838 260 R--S--S--P--S--V--S--T--G--T--G--D--F--V--S--A--V--R--K--L-- 279 841 CATCGCAAAATTCTGGCCATTGGAAGTATAAGAAAGGTCCTGAATACGGTAATGGTGTTT 900 839 CATCGCAAAATTCTGGCCATTGGAAGTATAAGAAAGGTCCTGAATACGGTAATGGTGTTT 898 280 A--S--Q--N--S--G--H--W--K--Y--K--K--G--P--E--Y--G--N--G--V-- 299 901 CAACTGTTTCTGTACCCAAGCAGTACAGTTCTACGACCAAAACATCTTCTGGAAACAAGT 960 899 CAACTGTTTCTGTACCCAAGCAGTACAGTTCTACGACCAAAACATCTTCTGGAAACAAGT 958 300 S--T--V--S--V--P--K--Q--Y--S--S--T--T--K--T--S--S--G--N--K-- 319 961 TTCAAAGTGTTAGCAGTGCAAGAGCTGCTCCATGGCTCGAAACTGGAGATGCAGTAGGTA 1020 959 TTCAAAGTGTTAGCAGTGCAAGAGCTGCTCCATGGCTCGAAACTGGAGATGCAGTAGGTA 1018 320 F--Q--S--V--S--S--A--R--A--A--P--W--L--E--T--G--D--A--V--G-- 339 1021 ATGCCCATCTTGATATACCAAGTCATTTGTGTGGATAGCGTGTTTCCCTCCTGTATGTTT 1080 1019 ATGCCCATCTTGATATACCAAGTCATTTGTGTGGATAG...................... 1056 340 N--A--H--L--D--I--P--S--H--L--C--G--*-...................... 351 1081 GATGATTTATTCTGTTCCACAACTATAGACTGATCTCTTTATGTTTATATGCAAATCAAT 1140 ............................................................ ............................................................ 1141 AGCAAACATGTACTCAGAATCAAGGGGAGAAGCCCGTGATTTTGCCCGCATCCGAAATGC 1200 ............................................................ ............................................................ 1201 ATGTTTTGAGCAGGTAAGCATCATCCATTGTGGTCTCAGTTGCATCTCGTATGCATTTGC 1260 ............................................................ ............................................................ 1261 ATCCATGGGTGTACGAGTGAAATGTGCCACATGCTTATACAACTTACCTGCACCAGTAGC 1320 ............................................................ ............................................................ 1321 CTTGTATTGTTTCTTGATAAAATATCTACTTCCATTTTGACCCTATAAATTTTGCCATTT 1380 ............................................................ ............................................................ 1381 ATCATCCTGTATCAATTTGTTTGTGTGTACTATCGCCATGTAATATGCATTCCATCCATC 1440 ............................................................ ............................................................ 1441 CACTATTAAAAATTTAGCCTCTGGCATTTCGTTTATTAATAATTTTTTACACGGTTGTTG 1500 ............................................................ ............................................................ 1501 TATCATCAAATATTGATGTTTACATGCTACTCTTAGTATAACCTCTTCAATTCCTTTTAT 1560 ............................................................ ............................................................ 1561 TACTTATATTTTGAGTATGAAAATTGGTTTGTGCCTATTATCATGTCCACCACATCACTG 1620 ............................................................ ............................................................ 1621 ACGTTCATTTAGCTGACCTCATTTGCTGTATCTTTTGCTTATGAGTGAATTGAAATTATA 1680 ............................................................ ............................................................ 1681 ATACAATATGTAACTTGTTTACATCTTTTAGCTGAAGTATTTACATAAAGATCTACTTGA 1740 ............................................................ ............................................................ 1741 CAGGCTAGACAGGCTTACCTGATTGGCAACAAAGCTCTAGCCAAGGAATTGAGTATGAAG 1800 ............................................................ ............................................................ 1801 GGACAGACATATAACACACAAATGAAAGCATCTCATGAGAAAGCAAGAGAAGCTATTTAT 1860 ............................................................ ............................................................ 1861 CGACAGAGGTCGCCTAACTGGTTCCCTGTTCTTTCTGCGCTGGATGGAAAATCCTTTTCA 1920 ............................................................ ............................................................ 1921 TGCCAATTTATACTTTGTCCACCCGATTGACAAGCTGCGCCTTGTACTGTTCCTAATATT 1980 ............................................................ ............................................................ 1981 TACAAGTACACTTAACATATCATATGTTTTTGTTGCAATGTTCCTCAGGAACCCATCTTC 2040 ............................................................ ............................................................ 2041 GCAACGAGGGAGCGACCGTCTGATCGATCTACATGGTCTCCATGTGAACGAAGCAATCCA 2100 ............................................................ ............................................................ 2101 TATACTTAAGGTCGAGCTCGGTACTCTTAAGAGCACCGCGAGGGCTACAGGTGAGAGGAT 2160 ............................................................ ............................................................ 2161 GCAAGTCATGATATGTGTCGGGACAGGTCATCACACCAAGGGTTCTCGCACCGCCAGGCT 2220 ............................................................ ............................................................ 2221 GCCCATCGCCGTCGAGCAGTTTCTTCTGGAGGAAGGCCTCCACTACACGCAGGCACAACC 2280 ............................................................ ............................................................ 2281 TGGTTTGCTCCGTGTTGTGGTGTTCTAACATCTCTTAGGTCAGCAGCACGAAGAAAAAAG 2340 ............................................................ ............................................................ 2341 AAGCAAAACAAAAAAAGGAGAAAGAGATGTAGGGAAAAGAAAAACCTAAAAAAAATGGCC 2400 ............................................................ ............................................................ 2401 GCTGTTGCAGCACTGTAATTTTCTTGTAGTTGTATATTAAAAGAGGCAGCAGGAGAATAG 2460 ............................................................ ............................................................ 2461 CCTGACAACAGAATACAGTGTAAAATTATACATAGCTTCATTCAATTCACATTCCATTC 2519 ........................................................... ...........................................................
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Ensembl Plants release 61 - May 2025 © EMBL-EBI EMBL-EBI
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