Oryza sativa Japonica Group (IRGSP-1.0)
Location
About this transcript

This transcript has 3 exons, is annotated with 9 domains and features and is associated with 397 variant alleles.

Gene
Show/hide columns (1 hidden)
  • Name
  • Transcript ID
  • bp
  • Protein
  • Translation ID
  • Biotype
  • UniProt
  • RefSeq
  • Flags
NameTranscript IDbpProteinBiotypeUniProtRefSeqFlags
MUB3-201Os02t0750600-011071119aa
 
Protein coding
Q6Z8K4 -Ensembl Canonical
Codons
  • Alternating codons
  • Alternating codons
Exons
  • An exon
  • Another exon
Variants
  • loading
Other
  • UTR
Markup
  • loading
                                                                          
     1 CCTGTGCCCCCTCCTCGTCTTTCGTCTCTTCTCTCCTTCCTTCCTCCCCTTCTCTTCCTC     60
       ............................................................       
       ............................................................       

                                                                          
    61 TCCTCCCACCGAGTCGCCGCCCTCTCGCTTTCAACCCCCACACGGAAGCAAGAATTGTTC    120
       ............................................................       
       ............................................................       

                                                                          
   121 ATCAAAACCCGATCTTTGGCGTGGCCCCGTGGATTTCTTGCGATCTGTTTGGTGCTATGG    180
       ............................................................       
       ............................................................       

                                                                          
   181 ATTTCTGATCCGGGGTTTCTTGGATCTTGGGGAGTAGGAGGTGGGGGGCGGCGATCTGGC    240
       ............................................................       
       ............................................................       

                                                                          
   241 CGGGAGATGGCCGGCGGGAAGGAGCCGATCGAGGTCAAGTTCCGGCTTTTTGATGGTACG    300
       ......ATGGCCGGCGGGAAGGAGCCGATCGAGGTCAAGTTCCGGCTTTTTGATGGTACG     54
       ......-M--A--G--G--K--E--P--I--E--V--K--F--R--L--F--D--G--T-     18

                                                                          
   301 GACATCGGCCCGAGCAAGTACGACCCCTCCACCACCGTCTCCGCGCTCAAGGAGTTCATC    360
    55 GACATCGGCCCGAGCAAGTACGACCCCTCCACCACCGTCTCCGCGCTCAAGGAGTTCATC    114
    19 -D--I--G--P--S--K--Y--D--P--S--T--T--V--S--A--L--K--E--F--I-     38

                                                                          
   361 CTCGCTCGGTGGCCGCAAGATAAGGAAATAACTCCAAAAACTGTCAATGACCTGAAGCTC    420
   115 CTCGCTCGGTGGCCGCAAGATAAGGAAATAACTCCAAAAACTGTCAATGACCTGAAGCTC    174
    39 -L--A--R--W--P--Q--D--K--E--I--T--P--K--T--V--N--D--L--K--L-     58

                                                                          
   421 ATTAATGCCGGACGGATATTGGAGAATAACCGGACACTTGCTGAGTCCCGTGTTCCAGTA    480
   175 ATTAATGCCGGACGGATATTGGAGAATAACCGGACACTTGCTGAGTCCCGTGTTCCAGTA    234
    59 -I--N--A--G--R--I--L--E--N--N--R--T--L--A--E--S--R--V--P--V-     78

                                                                          
   481 GGAGAGGTTCCAGGAGGTGTAATTACAATGCATGTGGTAGTACGCCCTCCACAACCCGAC    540
   235 GGAGAGGTTCCAGGAGGTGTAATTACAATGCATGTGGTAGTACGCCCTCCACAACCCGAC    294
    79 -G--E--V--P--G--G--V--I--T--M--H--V--V--V--R--P--P--Q--P--D-     98

                                                                          
   541 AAAAACAGTGAGAAGCAGCTTGCGAATTCCCCCAAGCAGAACAGATGTGGGTGTACCATA    600
   295 AAAAACAGTGAGAAGCAGCTTGCGAATTCCCCCAAGCAGAACAGATGTGGGTGTACCATA    354
    99 -K--N--S--E--K--Q--L--A--N--S--P--K--Q--N--R--C--G--C--T--I-    118

                                                                          
   601 CTGTGATACGCCGCCTGCCTGATGATGATGTACAATGTCTCGCTCTAGGATTTTGTATCT    660
   355 CTGTGA......................................................    360
   119 -L--*-......................................................    119

                                                                          
   661 GCTTTCCTGTGTTCGCAGCTCTTGTGAATTCATTTTGACATCCAATTTTAGAGCCATTCA    720
       ............................................................       
       ............................................................       

                                                                          
   721 AATCCTAGAAATATACATACTTTAACACCCGTCAAATATGCTTGGGAGCTGGAACTGAAG    780
       ............................................................       
       ............................................................       

                                                                          
   781 GTTTCTGGAGGATGCGTCATGGTGATCTTAATGTTGTAACGAGTGTGCAGAAGACAGGGA    840
       ............................................................       
       ............................................................       

                                                                          
   841 TTGGATGCTTTCTGTTGTATAAATTGTAATGTGAAAACGAAAAAAATTCTCTCCTTTTTC    900
       ............................................................       
       ............................................................       

                                                                          
   901 TTTTTTCTCTTGCCACATTGACATTTTATCGATTCTTTTTAGCACTGGTGTTTGTCATGT    960
       ............................................................       
       ............................................................       

                                                                          
   961 AAAACCAGAATATTGTACTCATATATGTAAGCTGAAAAAAGGGGTGTTTTATTCTGTTAC   1020
       ............................................................       
       ............................................................       

                                                                          
  1021 GTGGACGGAAAAAGGAAAGAAAAAAAATAGAATCTGTCCTATAGTTATCCC            1071
       ...................................................                
       ...................................................