Oryza sativa Japonica Group (IRGSP-1.0)
Location
About this transcript

This transcript has 22 exons, is annotated with 20 domains and features, is associated with 112 variant alleles and maps to 20 oligo probes.

Gene
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  • Name
  • Transcript ID
  • bp
  • Protein
  • Translation ID
  • Biotype
  • UniProt
  • Flags
NameTranscript IDbpProteinBiotypeUniProtFlags
-Os06t0731600-0041731069aa
 
Protein coding
A0A0P0X1F1 Ensembl Canonical

Domains

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  • Domain source
  • Start
  • End
  • Description
  • Accession
  • InterPro
Domain sourceStartEndDescriptionAccessionInterPro
PANTHER46861-PTHR10694-
SMART115213-SM01014-
CDD120213-cd16100-
CDD291335-cd15543-
PROSITE profiles118217ARID DNA-binding domainPS51011IPR001606 [Display all genes with this domain]
SMART119218ARID DNA-binding domainSM00501IPR001606 [Display all genes with this domain]
Pfam121213ARID DNA-binding domainPF01388IPR001606 [Display all genes with this domain]
PROSITE profiles429595JmjC domainPS51184IPR003347 [Display all genes with this domain]
SMART429595JmjC domainSM00558IPR003347 [Display all genes with this domain]
Pfam462578JmjC domainPF02373IPR003347 [Display all genes with this domain]
SMART5091JmjN domainSM00545IPR003349 [Display all genes with this domain]
PROSITE profiles5192JmjN domainPS51183IPR003349 [Display all genes with this domain]
Pfam5285JmjN domainPF02375IPR003349 [Display all genes with this domain]
Pfam9331058Lysine-specific demethylase-like domainPF08429IPR013637 [Display all genes with this domain]
Pfam671722Zinc finger, C5HC2-typePF02928IPR004198 [Display all genes with this domain]
PROSITE profiles288338Zinc finger, PHD-fingerPS50016IPR019787 [Display all genes with this domain]
Pfam291335Zinc finger, PHD-fingerPF00628IPR019787 [Display all genes with this domain]
SMART290336Zinc finger, PHD-typeSM00249IPR001965 [Display all genes with this domain]
PROSITE patterns291335Zinc finger, PHD-type, conserved sitePS01359IPR019786 [Display all genes with this domain]

Other features

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  • Feature type
  • Start
  • End
Feature typeStartEnd
Alphafold11069