Summary
Sequence
Protein Information
- Protein summary
- Domains & features
- Variants
- PDB 3D protein model
- AlphaFold predicted model
Genetic Variation
External References
- General identifiers
- Oligo probes
Supporting evidence
ID History
- Transcript history
- Protein history

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Ensembl Plants is produced in collaboration with Gramene

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Transcript: Os05t0345500-02

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Location

Chromosome 5: 16,268,759-16,273,940 reverse strand.

About this transcript

This transcript has 9 exons, is annotated with 10 domains and features, is associated with 239 variant alleles and maps to 38 oligo probes.

Gene

This transcript is a product of gene Os05g0345500 Show transcript tableHide transcript table

Name	Transcript ID	bp	Protein	Biotype	UniProt	Flags
-	Os05t0345500-03	2798	806aa	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A0P0WL39 Q5W6S2	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical,
-	Os05t0345500-01	2978	470aa	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A0P0WL32	-
-	Os05t0345500-02	2298	470aa	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A0P0WL32	-

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Domains & features

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Domains

Original project that identified the domainDomain source	Start	End	Description	Accession	InterPro
PANTHER	1	457	-	PTHR47457	-
CDD	349	436	-	cd18186	-
Pfam	201	297	BTB/POZ domain	PF00651	IPR000210 [Display all genes with this domain]
PROSITE profiles	209	272	BTB/POZ domain	PS50097	IPR000210 [Display all genes with this domain]
SMART	209	302	BTB/POZ domain	SM00225	IPR000210 [Display all genes with this domain]
Pfam	342	449	BTB/POZ domain	PF00651	IPR000210 [Display all genes with this domain]
PROSITE profiles	350	419	BTB/POZ domain	PS50097	IPR000210 [Display all genes with this domain]
SMART	350	453	BTB/POZ domain	SM00225	IPR000210 [Display all genes with this domain]
Pfam	54	150	Farnesoic acid O-methyl transferase	PF12248	IPR022041 [Display all genes with this domain]

Other features

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Feature type
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Feature type	Start	End
Alphafold	1	470

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