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    Transcript: Os05t0256000-01 OsWD40-116-201

    Location

    Chromosome 5: 9,448,801-9,454,455 forward strand.

    About this transcript

    This transcript has 8 exons, is annotated with 28 domains and features, is associated with 253 variant alleles and maps to 28 oligo probes.

    Gene

    This transcript is a product of gene Os05g0256000 Show transcript tableHide transcript table

    Show/hide columns (1 hidden)
    • Name
    • Transcript ID
    • bp
    • Protein
    • Translation ID
    • Biotype
    • UniProt
    • Flags
    Download what you seeDownload whole table
    NameTranscript IDbpProteinBiotypeUniProtFlags
    OsWD40-116-201Os05t0256000-011395326aa
     
    Protein coding
    		Q0DJM3 Q60EF6 Ensembl Canonical

    Domains & features

    Domains

    Show/hide columns
    • Domain source
    • Start
    • End
    • Description
    • Accession
    • InterPro
    Download what you seeDownload whole table
    Domain sourceStartEndDescriptionAccessionInterPro
    PANTHER1323-PTHR19877-
    PROSITE profiles637-PS50294-
    CDD7314-cd00200-
    PROSITE profiles4884-PS50294-
    PROSITE profiles142178-PS50294-
    PROSITE profiles187222-PS50294-
    PROSITE profiles284314-PS50294-
    HAMAP1326Eukaryotic translation initiation factor 3 subunit IMF_03008IPR027525 [Display all genes with this domain]
    SMART138WD40 repeatSM00320IPR001680 [Display all genes with this domain]
    Pfam637WD40 repeatPF00400IPR001680 [Display all genes with this domain]
    PROSITE profiles647WD40 repeatPS50082IPR001680 [Display all genes with this domain]
    SMART4180WD40 repeatSM00320IPR001680 [Display all genes with this domain]
    Pfam4380WD40 repeatPF00400IPR001680 [Display all genes with this domain]
    PROSITE profiles4889WD40 repeatPS50082IPR001680 [Display all genes with this domain]
    SMART135174WD40 repeatSM00320IPR001680 [Display all genes with this domain]
    Pfam141174WD40 repeatPF00400IPR001680 [Display all genes with this domain]
    PROSITE profiles142183WD40 repeatPS50082IPR001680 [Display all genes with this domain]
    SMART177219WD40 repeatSM00320IPR001680 [Display all genes with this domain]
    PROSITE profiles187228WD40 repeatPS50082IPR001680 [Display all genes with this domain]
    Pfam188219WD40 repeatPF00400IPR001680 [Display all genes with this domain]
    SMART222262WD40 repeatSM00320IPR001680 [Display all genes with this domain]
    SMART277316WD40 repeatSM00320IPR001680 [Display all genes with this domain]
    Pfam283314WD40 repeatPF00400IPR001680 [Display all genes with this domain]
    PROSITE profiles284314WD40 repeatPS50082IPR001680 [Display all genes with this domain]
    PROSITE patterns6781WD40 repeat, conserved sitePS00678IPR019775 [Display all genes with this domain]
    PROSITE patterns161175WD40 repeat, conserved sitePS00678IPR019775 [Display all genes with this domain]

    Other features

    Show/hide columns
    • Feature type
    • Start
    • End
    Download what you seeDownload whole table
    Feature typeStartEnd
    Alphafold1326
    Alphafold1326

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