Oryza sativa Japonica Group (IRGSP-1.0) ▼ 
Summary
SequenceProtein InformationProtein summaryDomains & featuresVariantsPDB 3D protein modelAlphaFold predicted modelGenetic VariationExternal ReferencesSupporting evidenceID History.
Chromosome 3: 29,126,803-29,134,828 forward strand.
This transcript has 16 exons, is annotated with 12 domains and features, is associated with 377 variant alleles and maps to 63 oligo probes.
This transcript is a product of gene Os03g0719100 Show transcript tableHide transcript table
.
| Domain source | Start | End | Description | Accession | InterPro |
|---|---|---|---|---|---|
| PANTHER | 16 | 643 | - | PTHR10782 | - |
| CDD | 124 | 176 | - | cd15570 | - |
| CDD | 371 | 420 | E3 SUMO-protein ligase SIZ1/2, SP-RING finger | cd16792 | IPR031141 [Display all genes with this domain] |
| Pfam | 18 | 48 | SAP domain | PF02037 | IPR003034 [Display all genes with this domain] |
| PROSITE profiles | 18 | 52 | SAP domain | PS50800 | IPR003034 [Display all genes with this domain] |
| SMART | 18 | 52 | SAP domain | SM00513 | IPR003034 [Display all genes with this domain] |
| PROSITE profiles | 357 | 440 | Zinc finger, MIZ-type | PS51044 | IPR004181 [Display all genes with this domain] |
| Pfam | 370 | 418 | Zinc finger, MIZ-type | PF02891 | IPR004181 [Display all genes with this domain] |
| SMART | 124 | 177 | Zinc finger, PHD-type | SM00249 | IPR001965 [Display all genes with this domain] |
| PROSITE patterns | 125 | 176 | Zinc finger, PHD-type, conserved site | PS01359 | IPR019786 [Display all genes with this domain] |
| Feature type | Start | End |
|---|---|---|
| Alphafold | 1 | 813 |
| Alphafold | 1 | 813 |
.
Ensembl Plants release 60 - October 2024 © EMBL-EBI EMBL-EBI
.
.
![[RSS logo]](/i/rss_icon_16.png "Ensembl blog"){kind=icon}
![[twitter logo]](/i/twitter.png "Follow us on Twitter!")
