Summary
Sequence
Protein Information
- Protein summary
- Domains & features
- Variants
- PDB 3D protein model
- AlphaFold predicted model
Genetic Variation
External References
- General identifiers
- Oligo probes
Supporting evidence
ID History
- Transcript history
- Protein history

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Ensembl Plants is produced in collaboration with Gramene

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Transcript: Os03t0681400-01 OsUBC25-201

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Location

Chromosome 3: 27,111,495-27,116,436 reverse strand.

About this transcript

This transcript has 6 exons, is annotated with 9 domains and features, is associated with 160 variant alleles and maps to 46 oligo probes.

Gene

This transcript is a product of gene Os03g0681400 Show transcript tableHide transcript table

Name	Transcript ID	bp	Protein	Biotype	UniProt	Flags
OsUBC25-201	Os03t0681400-01	793	161aa	Gene/transcipt that contains an open reading frame (ORF).Protein coding	Q0DPL8 Q9AYE3	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical,

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Domains & features

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Domains

Original project that identified the domainDomain source	Start	End	Description	Accession	InterPro
SMART	18	161	-	SM00212	-
PANTHER	14	140	Ubiquitin-conjugating enzyme	PTHR24067	IPR050113 [Display all genes with this domain]
PROSITE profiles	15	161	Ubiquitin-conjugating enzyme E2	PS50127	IPR000608 [Display all genes with this domain]
CDD	17	117	Ubiquitin-conjugating enzyme E2	cd00195	IPR000608 [Display all genes with this domain]
Pfam	19	154	Ubiquitin-conjugating enzyme E2	PF00179	IPR000608 [Display all genes with this domain]

Other features

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Feature type
Start
End

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Filter

Feature type	Start	End
Alphafold	1	161
Alphafold	1	161
Alphafold	1	161
Alphafold	1	161

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