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    Transcript: Os03t0115400-01 OsWD40-60-201

    Location

    Chromosome 3: 870,844-875,516 forward strand.

    About this transcript

    This transcript has 7 exons, is annotated with 31 domains and features and is associated with 87 variant alleles.

    Gene

    This transcript is a product of gene Os03g0115400 Show transcript tableHide transcript table

    Show/hide columns (1 hidden)
    • Name
    • Transcript ID
    • bp
    • Protein
    • Translation ID
    • Biotype
    • UniProt
    • Flags
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    NameTranscript IDbpProteinBiotypeUniProtFlags
    OsWD40-60-201Os03t0115400-013090746aa
     
    Protein coding
    		Q0DVS2 Q10SP2 Ensembl Canonical

    Domains & features

    Domains

    Show/hide columns
    • Domain source
    • Start
    • End
    • Description
    • Accession
    • InterPro
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    Domain sourceStartEndDescriptionAccessionInterPro
    PROSITE profiles270303-PS50294-
    PROSITE profiles375407-PS50294-
    PROSITE profiles415450-PS50294-
    Prints289303G-protein beta WD-40 repeatPR00320IPR020472 [Display all genes with this domain]
    Prints393407G-protein beta WD-40 repeatPR00320IPR020472 [Display all genes with this domain]
    Prints435449G-protein beta WD-40 repeatPR00320IPR020472 [Display all genes with this domain]
    PANTHER11743WD repeat-containing protein WDR44/Dgr2PTHR14221IPR040324 [Display all genes with this domain]
    SMART258302WD40 repeatSM00320IPR001680 [Display all genes with this domain]
    Pfam270301WD40 repeatPF00400IPR001680 [Display all genes with this domain]
    PROSITE profiles270311WD40 repeatPS50082IPR001680 [Display all genes with this domain]
    SMART368406WD40 repeatSM00320IPR001680 [Display all genes with this domain]
    Pfam370405WD40 repeatPF00400IPR001680 [Display all genes with this domain]
    PROSITE profiles375415WD40 repeatPS50082IPR001680 [Display all genes with this domain]
    SMART409448WD40 repeatSM00320IPR001680 [Display all genes with this domain]
    Pfam411448WD40 repeatPF00400IPR001680 [Display all genes with this domain]
    PROSITE profiles415450WD40 repeatPS50082IPR001680 [Display all genes with this domain]
    SMART450489WD40 repeatSM00320IPR001680 [Display all genes with this domain]
    SMART504540WD40 repeatSM00320IPR001680 [Display all genes with this domain]
    SMART541581WD40 repeatSM00320IPR001680 [Display all genes with this domain]
    Pfam557581WD40 repeatPF00400IPR001680 [Display all genes with this domain]
    PROSITE profiles560581WD40 repeatPS50082IPR001680 [Display all genes with this domain]
    SMART699738WD40 repeatSM00320IPR001680 [Display all genes with this domain]
    Superfamily270737WD40-repeat-containing domain superfamilySSF50978IPR036322 [Display all genes with this domain]
    Gene3D218360WD40/YVTN repeat-like-containing domain superfamily2.130.10.10IPR015943 [Display all genes with this domain]
    Gene3D361621WD40/YVTN repeat-like-containing domain superfamily2.130.10.10IPR015943 [Display all genes with this domain]

    Other features

    Show/hide columns
    • Feature type
    • Start
    • End
    Download what you seeDownload whole table
    Feature typeStartEnd
    MobiDBLite140
    MobiDBLite2535
    MobiDBLite6292
    MobiDBLite6372
    Alphafold1746
    Alphafold1746

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