Oryza sativa Japonica Group (IRGSP-1.0) ▼ 
Summary
SequenceProtein InformationProtein summaryDomains & featuresVariantsPDB 3D protein modelAlphaFold predicted modelGenetic VariationExternal ReferencesGeneral identifiersOligo probesSupporting evidenceID History.
Chromosome 2: 25,828,426-25,831,324 reverse strand.
This transcript has 8 exons, is annotated with 14 domains and features and is associated with 60 variant alleles.
This transcript is a product of gene Os02g0643000 Show transcript tableHide transcript table
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| Domain source | Start | End | Description | Accession | InterPro |
|---|---|---|---|---|---|
| Gene3D | 34 | 165 | Immunoglobulin-like fold | 2.60.40.10 | IPR013783 [Display all genes with this domain] |
| PROSITE profiles | 42 | 162 | Major sperm protein (MSP) domain | PS50202 | IPR000535 [Display all genes with this domain] |
| Pfam | 43 | 147 | Major sperm protein (MSP) domain | PF00635 | IPR000535 [Display all genes with this domain] |
| Superfamily | 32 | 168 | PapD-like superfamily | SSF49354 | IPR008962 [Display all genes with this domain] |
| PIRSF | 35 | 259 | Vesicle-associated membrane-protein-associated protein | PIRSF019693 | IPR016763 [Display all genes with this domain] |
| PANTHER | 41 | 256 | Vesicle-associated membrane-protein-associated protein | PTHR10809 | IPR016763 [Display all genes with this domain] |
| Feature type | Start | End |
|---|---|---|
| MobiDBLite | 1 | 21 |
| Phobius | 1 | 236 |
| Phobius | 237 | 257 |
| Phobius | 258 | 259 |
| TMHMM | 235 | 257 |
| Alphafold | 1 | 259 |
| Alphafold | 1 | 259 |
| Ncoils | 203 | 230 |
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Ensembl Plants release 61 - May 2025 © EMBL-EBI EMBL-EBI
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