Summary
Sequence
Protein Information
- Protein summary
- Domains & features
- Variants
- PDB 3D protein model
- AlphaFold predicted model
Genetic Variation
External References
- General identifiers
- Oligo probes
Supporting evidence
ID History
- Transcript history
- Protein history

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Ensembl Plants is produced in collaboration with Gramene

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Transcript: Os01t0925800-01 OsUBC44-201

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Location

Chromosome 1: 40,596,070-40,599,069 reverse strand.

About this transcript

This transcript has 5 exons, is annotated with 12 domains and features, is associated with 153 variant alleles and maps to 53 oligo probes.

Gene

This transcript is a product of gene Os01g0925800 Show transcript tableHide transcript table

Name	Transcript ID	bp	Protein	Biotype	UniProt	Flags
OsUBC44-201	Os01t0925800-01	860	195aa	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A3A140 Q8S1Y5	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical,

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Domains & features

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Domains

Original project that identified the domainDomain source	Start	End	Description	Accession	InterPro
SMART	5	151	-	SM00212	-
CDD	158	193	Ubiquitin carrier protein 27, UBA domain	cd14312	IPR041974 [Display all genes with this domain]
PROSITE profiles	156	195	Ubiquitin-associated domain	PS50030	IPR015940 [Display all genes with this domain]
SMART	157	194	Ubiquitin-associated domain	SM00165	IPR015940 [Display all genes with this domain]
Pfam	158	192	Ubiquitin-associated domain	PF00627	IPR015940 [Display all genes with this domain]
PANTHER	5	149	Ubiquitin-conjugating enzyme	PTHR24067	IPR050113 [Display all genes with this domain]
PROSITE profiles	2	151	Ubiquitin-conjugating enzyme E2	PS50127	IPR000608 [Display all genes with this domain]
CDD	4	146	Ubiquitin-conjugating enzyme E2	cd00195	IPR000608 [Display all genes with this domain]
Pfam	6	145	Ubiquitin-conjugating enzyme E2	PF00179	IPR000608 [Display all genes with this domain]
PROSITE patterns	77	93	Ubiquitin-conjugating enzyme, active site	PS00183	IPR023313 [Display all genes with this domain]

Other features

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Feature type	Start	End
Alphafold	1	195
Alphafold	1	195

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