Summary
- Splice variants
- Transcript comparison
- Gene alleles
Sequence
- Secondary Structure
Gene families
Literature
Plant Compara
Pan-taxonomic Compara
- Gene Tree
- Orthologues
Ontologies
Phenotypes
Genetic Variation
Gene expression
Pathway
Molecular interactions
Regulation
External references
Supporting evidence
ID History
- Gene history

Configure this page

Share this page

Bookmark this page

Ensembl Plants is produced in collaboration with Gramene

.

Gene: OsATG1a Os03g0268200

.

Location

Chromosome 3: 8,896,186-8,901,979 reverse strand.

About this gene

This gene has 5 transcripts (splice variants), 176 orthologues and 1 paralogue.

Transcripts

Show transcript tableHide transcript table

Name	Transcript ID	bp	Protein	Translation ID	Biotype	UniProt	RefSeq	Flags
-	Os03t0268200-02	2696	714aa	Os03t0268200-02	Gene/transcipt that contains an open reading frame (ORF).Protein coding	Q10NJ0	-	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical,
-	Os03t0268200-03	4090	126aa	Os03t0268200-03	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A0N7KH01	-	-
-	Os03t0268200-04	2562	714aa	Os03t0268200-04	Gene/transcipt that contains an open reading frame (ORF).Protein coding	Q10NJ0	-	-
-	Os03t0268200-01	2443	212aa	Os03t0268200-01	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A0P0VVT3 C7IZT6	-	-
-	Os03t0268200-05	1007	182aa	Os03t0268200-05	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A0P0VVW5	-	-

.

Summary

.

.