Summary
- Splice variants
- Transcript comparison
- Gene alleles
Sequence
- Secondary Structure
Gene families
Literature
Plant Compara
Pan-taxonomic Compara
- Gene Tree
- Orthologues
Ontologies
- GO: Anatomical entity
Phenotypes
Genetic Variation
Gene expression
Pathway
Molecular interactions
Regulation
External references
Supporting evidence
ID History
- Gene history

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Ensembl Plants is produced in collaboration with Gramene

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Gene: OsCCS52A Os03g0123300

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Location

Chromosome 3: 1,327,450-1,331,022 forward strand.

About this gene

This gene has 2 transcripts (splice variants), 234 orthologues and 4 paralogues.

Transcripts

Show transcript tableHide transcript table

Name	Transcript ID	bp	Protein	Translation ID	Biotype	UniProt	Flags
OsCCS52A-201	Os03t0123300-01	2028	523aa	Os03t0123300-01	Gene/transcipt that contains an open reading frame (ORF).Protein coding	Q0DVM0 Q10SH0	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical,
OsCCS52A-202	Os03t0123300-02	1635	400aa	Os03t0123300-02	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A0P0VSP9	-

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Cultivars

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Genomic alignments

Gene tree

Orthologues

Paralogues

Families (Not available)

More views of comparative genomics data, such as multiple alignments and synteny, are available on the Location page for this gene.

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Personal Data