Summary
- Splice variants
- Transcript comparison
- Gene alleles
Sequence
- Secondary Structure
Gene families
Literature
Plant Compara
- Genomic alignments
- Gene tree
- Gene gain/loss tree
- Orthologues
- Paralogues
- Cultivars
  - Gene tree
  - Orthologues
  - Paralogues
Pan-taxonomic Compara
- Gene Tree
- Orthologues
Ontologies
- GO: Anatomical entity
Phenotypes
Genetic Variation
Gene expression
Pathway
Molecular interactions
Regulation
External references
Supporting evidence
ID History
- Gene history

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Ensembl Plants is produced in collaboration with Gramene

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Gene: RFC1 Os11g0572100

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Location

Chromosome 11: 21,443,052-21,452,910 forward strand.

About this gene

This gene has 4 transcripts (splice variants) and 168 orthologues.

Transcripts

Show transcript tableHide transcript table

Name	Transcript ID	bp	Protein	Translation ID	Biotype	UniProt	RefSeq	Flags
RFC1-201	Os11t0572100-01	3747	1021aa	Os11t0572100-01	Gene/transcipt that contains an open reading frame (ORF).Protein coding	Q2R2B4	-	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical,
RFC1-202	Os11t0572100-02	3675	1021aa	Os11t0572100-02	Gene/transcipt that contains an open reading frame (ORF).Protein coding	Q2R2B4	-	-
RFC1-203	Os11t0572100-03	2589	769aa	Os11t0572100-03	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A0P0Y3R4	-	-
RFC1-204	Os11t0572100-04	1121	277aa	Os11t0572100-04	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A0P0Y3K5	-	-

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Cultivars

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Genomic alignments

Gene tree

Orthologues

Paralogues (Not available)

Families (Not available)

More views of comparative genomics data, such as multiple alignments and synteny, are available on the Location page for this gene.

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Personal Data