Gene: Os06g0534500

Location

Chromosome 6: 19,999,929-20,000,815 forward strand.

About this gene

This gene has 1 transcript (splice variant), 27 orthologues and 1 paralogue.

Transcripts

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Name	Transcript ID	bp	Protein	Biotype	UniProt	Flags
-	Os06t0534500-00	887	262aa	Gene/transcipt that contains an open reading frame (ORF).Protein coding	Q5Z5G3 Q5Z725	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical,

Marked-up sequence

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Exons

Os06g0534500 exons
All exons in this region

Variants

Markup

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>chromosome:IRGSP-1.0:6:19999329:20001415:1
AGATAAAGGAGGAGCTGGCCAGGCGCGATGTGCGTTTTGGGGAGGAGATCGGGAGGATGA
GTAGAAGAACTAATTTGTTAAAGGGAGGGTCCACTTTTCATTGTAGGAAATCAATTTTAG
GAAGATTAGTTTTCTCACTTCCTATATTCAGTTTAGGAGAAAAAAAATAGTTTTGAAAAT
TAATTACTGTCAATATCTTGGTGATGCTCTGACACCTCTCTAAAAATACAATGTAAAAGC
TACACACCGTACACAAAAATTGTTATTACAAACTTTTTACCATACTAGTACGCTTGAATC
TAGCTTTTCTATAACTTCCAACAACCTCAATCAAATGATTCTGCCAGAAAGAATTCTGCA
AGAGTTTTTTAAGTGATTATATTTTTTTTTGGTCTGTTTGAAATGCTAGAGCCAACACTT
CAACAGAATCAAAATGCCGCGTTCCCGCACTTCCACTCTATACACTACGTGCTTGCCATG
CCATCCTCCCAATTCGGAACTCGATCGCCACCGCACGCGAATCCCAAACACAAATCATGC
TGCGCCCAACCTCCATATAGCGCGCGCAACCAAACCCCCCCCCCCCCCCCCCACCACTTT
CCCGCCACGTCCCCTGCGTGCCACATCGCGGCCGCTCTCCGCCGGCGCCGACGCGACGTC
TCTGACTCCGAGGCACGCCGCCGGCCATCGATCAGGCCATGCCCGGCGACTCGGCGTCGT
CGACGCTGCAGTACACGGGCATCGGCGCATTCGTCGCCATCGTCGGCATCGTCGTCCTGG
CCGTCATCTTCTACACCCGTTCGTCCGCCCGTCACGCCGCCCCCGGCGCGGCGCCCGACG
CGGTCACCGCGCTCCAGGGGCAGCAGCAGCAGCGCGGCCTCGGCCTCGGCCCCGACGACG
TCTCCGTGCTCCCGACGTTCACGTACCACGCCGCCGCCACCGCCTCGCCCGGCCGATGCG
GCCTGATCGGACGCGGGGACGCGAAGGCGGCGGCGGACTGCTGCGCCGTCTGCCTCGACG
AGCTCGGCGAGGGCGCCGTCGTGCGCATGCTGCCGTCGTGCAAGCACTACTTCCACGCCA
CCTGCGTCGACGTTTGGCTGCTGTCGCGGGCCACGTGCCCGGTGTGCCGGGGGAGCCCAG
GGCAGGAGAAGGTCCGCCTCGGCCTCGCGTCCCTCTCACCGCCGCTGCCGCAGCTGCGCC
GGTGCGCGCCGTCGCCGCCCAAGGAGGCCGCCGCCGCCGCCGCTGCCGATACGTCGAGAG
CCAACGACGATGACTCCTCCGCAGCCGCGTCGAGGTCGCCATCCCCGATAAGATCGAGCA
CGCGTTTCGACCTCGCGGCCGCCGCCATTGACGCCGCCGCCCGTAGTCCGGCAATGTCGC
CGTCGCCGACTCGCCCGTGGACTCCGGAGCGTGTGGCGCGGGTGTCAAGGTCACCGTCTC
CCGTGACGACGACGGCGACGACCGATTTGCACGTGGTCGAAGTGTAGAGTACACGGAATG
ACGGAAGCGTACTAATTTACGCTTTCGCAAGAGGATGTCACATTATTGACTTTTCAGTTA
TTAAGATGTTTATAACCACGAAATTCATCTAAGCAAATGAGCCGATTGGCTCAAATGTGC
ATTCACCAATTTGACGCTGATATAAGAGGTTAGAAATAATACAAAAATTCATTTTTTTTC
TACTCTTGTTTGTTTGGTGTTCATGCTGCCGAAGGTGATCGTGACAACTTGATTCTTTCC
TATACTTGACTGCTTATTTGGTACGCAAGTGGACATTTGTCAGAACAGACTGACTTGTCA
TGTAGCCTACCCTTTGACTTTATTTACAAGACATTTTATGTTTTTTTTAGAACAGACATT
TTAGGTTATCAACCCATTTCGACGATGCGCTAAAAAAGGCTTATTTTCATTTCAGCAATA
TTTTTTTTCTCTCAAGCACATGCTGCATCATCATTAAAAAGGAGGAATTATGACAATATG
GTACATGTCTATAAAAACGAAAGAAATAACAAATTTGATCCCTCAAGTTCAGCAAGGTTT
TGAGCATGTTTAGAAAGCTTTTGGCAGCAATAGTTTCTCACAGAATT

Gene: Os06g0534500

Marked-up sequence

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Gene: Os06g0534500

Marked-up sequence

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