Oryza sativa Japonica Group (IRGSP-1.0)
Location
About this gene

This gene has 1 transcript (splice variant), 133 orthologues and 1 paralogue.

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  • Name
  • Transcript ID
  • bp
  • Protein
  • Translation ID
  • Biotype
  • UniProt
  • RefSeq
  • Flags
NameTranscript IDbpProteinBiotypeUniProtRefSeqFlags
CAK1-201Os06t0171700-011120195aa
 
Protein coding
B9FRR5 Q5SNL8 -Ensembl Canonical
Exons
  • CAK1 exons
  • All exons in this region
Variants
  • loading
Markup
  • loading
>chromosome:IRGSP-1.0:6:3595401:3598891:1
GTTATGAAATCCGTCGAGGATGTCAATCAGCGAGCTGACAGCGAACCCCGACGCGCTTCC
GCCATCTCCTGCGGCGGCTACTCCGGCTGCATCCGCCGACGCCGCGCTGGTGGCGACCAC
TTCCCCGAAATCAGCACCACCCGCGTCGTGCAGGTACGCGCCTTCCCCCTCGGCGCGCAC
GTCCTCCTCGGGAGCCTTCTCCGCCGCGGCGGGGCCGGCCGGCGGCGGCGAGCGGGGGTA
CCAGGAGAAGCTTCGCGCGGGGACGGCAGCGAAAGGGACTAGCAGCGGCGGCAAGCGAGG
GGGTGACGGGAGCAGCGGCGCGCGGGTGGTGGGGCTTGGATCCGAGGCGGAGAGGTGGTG
GTGGTGGAGCACGGCCAGCGGCCGCGGGAGGCGCCGACCGCCGCCGCCGCCGCCGCCGGC
GAGGCGGCCGAGGAGGCGAAGCGGAAGCGCCATGTGGTTTGTCGTGACGTGGCGTGACGT
CACAGGAGGGTGTAAAGCACGTGACGAGTTCTCTCCGAGCCGTTCGATTAGGAATGGACG
GCTCAGATCCAATATGGCACATACATTTTCACAAAACCCCCTTGTTTTTGTAGTAATTAC
AATTCTGGGCCTAGGCATCTCCCCTCTTCTCGGGCAAGAACCCTAGCCACCTTCGCCAGT
CTCCGGCTCGAACGCGGCCACGGCGAGGCTGCGCGGCCAGTGATCTTGCGGTCTAGGCGG
CGGCGGCGGAGGAGGAGGAGGAGGAGGAGGCGTCGAGATGGTGGTGGCATCCGGTGGAGG
GCGGAACGCGTGGGCGAAGGAGATGACCATCCGCCGCAGGATTACCAGCATGTGAGCTAC
CTAACCTGAACTCCTCGGATTTTCTTTTTTTAAAGAAAAGATTTAGCTGTCAAGTTCATG
AGTTTGATGCTTTGTGTGGATAACGATCTCAGATTCAACAAGACGCGGGAGCATTTTCCG
TCCCTGAAAGATTACAACGACTATCTTGAGGAAGTCGAGGATATGAGTAAGTTGTTTTAT
TACTTGTCTCTAGGTTGGTCATCATTCAACAGTAAGGAAGCAAATGTGATTGATCAAGAT
TTGCTTGTTTGAAATTCGTTTTTCAAGCTTTCAACCTGATCGAGGGGATAGATGTCGAGG
TGATTGAAGCTAAAATTGCCAGATATCAACAGGAAAATGCTGAACAGATATATTTGTCCC
GGGCTAAAAGGGTATGCTGTTCATCATTGCGGGCTCTCGTGCTGTATTTGAATTTTATGA
TTGATAACCATCTTATTTCAACATCTTTTTGTCTGTAGGCCGAAGATCTTGCTGCCGCAC
TTAAAGCAAGCAGAATGAACCCTGGCAAGGCTGGTGCCAATGACACGGTTAGTTGATAGT
ATTAGCATTAGATTATACAGTTAATATATTTTTGCTCCTTCAACAGTATAGGTGTTGAGG
ATTTTATGGTTGGATGTGTATTTTTTATATATACATGAGAAATTCCATCATCTTTGAATG
ATTGCAAGTCTTCCTCTTTGGAGAGCATCATGTATGAATCTTAATAGATTCTAGCTGTAA
AAAGCTCTGATAAAATTTCTTCAGAAAATGGTATTGAAGGCATACTGAATTTTACTCCCG
ACTGTACAAAGATCTAATAAAATTTCTTCAGGAAATGATATTTAAGGAATTACTGAATTT
TAAAGTGCAAAACTTTAGAATCTTTTTAACTTGACATCCTATCAAAAGACGTTTGATACA
AGACTTGAAAGAAGAAATACTGTCATCAAATTGTGATCAAGCTGAAACATGCCACCACAT
GAGTACATGACTAAAGTAGAAATTATAGGGTGCCGATGTAAAGGCCAACCATTGGTTTCA
GAAATGATGTCTCAGTTGACAATGCATTTCATATCCTTAAACAATTTGGTTTGCATAGTA
ATCTTTCAGCTTCACAAATTGGCTGTTTAAATTATCTGGCTATATTATGGCATTACTATG
TACCATGTCAGTTTGGACCTTACTTTGTAGTATTTGCTAATTTTGTTGAGCTATTCTATT
TCATCTGATTTGACTACTTCATGTGATGTGAGGTAGAATTGTAGAAAGAATTTGATGTAA
ACTTCTCGTTCTTCTTCTCTGTAACAGCAACACTTGAAATTGGTGCATTCATCTATTGAT
TCGATACACTGTAATATGTTCTGTTCTTTTGTTTATTAGAAAGATGTGGTATTTATTCCA
ATACTTGGTACTCTTGCAACTTGTAACAGGCTGCTGGAAGCTCTCAGGGCATTAGTAGTG
GCGCGGGAGTTCAGGAAGGCCAGTATGCGCCTGCTGCTGTTCCCGGTGGGCTAGCTCAGC
CTCGGCCAACAGGGATGGCCCCTCAACCGATCGGCGGTTCATCGGTTCCTCTTCAAGGAG
ATGATGAGGAGACCATGAGGCTACGTGCGGAGAGCGGGGCTCGAGCTGGTGGATGGTCCA
TCGAAATGTGCAAGAGAAGAGCATTGCAGGAAGCGTTCAGTACCATATTCGTCTGACGGT
CAGATTAGACGCAAGAGCACCTAACATGTAGGATGCCTGATAATTTTGTGGACATCCTTT
GGATGAGATGATGGGTTTTTACTGACCGATTGACATGGTTGGCTTGGTCCAAACATATGA
ATTTTGAGCACTTGGGATTGAAGCTCCAATCATCGTCAAGTGGCCTGGTGATTGGAAAAG
ACCATCCCTTCTCATTCTCAGCAATCTGGAAAATTGTGCATTTCTGTTTTTGTTCATAGC
ATATGAATGGTGATTGGAAAAGACCATCCCTTCCCATTCTCAGCAATCTGGAAAATTGCG
CATTTCTGCTTTTGTTCATAGCATATGAATGTTGTGTGCTTGCCTGACTAAATTATCAAA
AGCATATTGTGATAGTGAGACTGGTTGGTTTTCTTATTTGTGATAGTTCGTTGTTTCTCT
AGCTTGGCCATGGCCCATTTGTAATACAAAATCTTTTCAGACTCAAACAGATCGGACTAC
ATTATCAAAATTAGGAGCTGCCAATTCGCATGAACCCCCAACATGACTAAATATACAGTT
CTTATCACATCCTTCAGCTCTTGTAAAATCTACTAGTAGATTATTTGTAACAACATTGGT
TTTACATGTTACAATTGTTGGCCCTCTAATCAATCGAATACTTCATGCATTCATGGTCAA
TAAAATGAAATTGTTACACAGTTATAACTTACATTCAGGAACCTATCCTATCTCCTCTTA
GAAACTGGGCTTACCTTGCAAACTTCCACATCAAAACCAAAGTCCATGAGAACAAGTATC
CAGGCACGCTGTTGCTCAGACAGCTGGTCCCTTGGCCCTTTGACCTCCACAAGTTTAGCT
TCACCGCCTCCTCTTTCATCAAGGAAACGCCATAGCAGCAGATCAGGCATTCCACTGGAC
CAGCTTCTGTAATCGAGGGCTAGATGCCGGAGCAGAGATGCCAAGCGATGGCCACCGGTG
CATACGACGGC