Oryza sativa Japonica Group (IRGSP-1.0)
Gene Synonyms

HDA702

Location
About this gene

This gene has 2 transcripts (splice variants), 160 orthologues and 13 paralogues.

Show/hide columns (1 hidden)
  • Name
  • Transcript ID
  • bp
  • Protein
  • Translation ID
  • Biotype
  • UniProt
  • Flags
NameTranscript IDbpProteinBiotypeUniProtFlags
HDAC1-201Os06t0583400-012117518aa
 
Protein coding
Q7Y0Y8 Ensembl Canonical
HDAC1-202Os06t0583400-022510460aa
 
Protein coding
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Show/hide columns
  • Type
  • Ancestral taxonomy
  • Ensembl identifier & gene name
  • Compare
  • Location
  • Target %id
  • Query %id
TypeAncestral taxonomyEnsembl identifier & gene nameCompareLocationTarget %idQuery %id
Ancient paraloguesEukaryotes (Eukaryota)

Os06g0571100 

OsHDAC6
No description
6:22,123,353-22,127,346:-123.30 %15.83 %
Ancient paraloguesEukaryotes (Eukaryota)

Os12g0182700 

OsHDAC10
No description
12:4,194,063-4,198,878:117.38 %14.86 %
Ancient paraloguesEukaryotes (Eukaryota)

Os05g0440632 

No description
5:21,570,249-21,570,913:-113.89 %3.86 %
Ancient paraloguesEukaryotes (Eukaryota)

Os05g0440300 

No description
5:21,567,352-21,571,809:-121.27 %16.22 %
Ancient paraloguesEukaryotes (Eukaryota)

Os05g0440250 

No description
5:21,561,375-21,564,322:-123.72 %17.95 %
Ancient paraloguesEukaryotes (Eukaryota)

Os11g0201400 

No description
11:5,063,575-5,064,534:145.77 %28.19 %
Ancient paraloguesEukaryotes (Eukaryota)

Os08g0344100 

HDA705
No description
8:15,554,139-15,559,145:160.92 %53.86 %
Ancient paraloguesEukaryotes (Eukaryota)

Os11g0200000 

No description
11:5,027,829-5,029,584:-146.05 %40.54 %
Ancient paraloguesEukaryotes (Eukaryota)

Os07g0164100 

HDA704
No description
7:3,436,026-3,444,708:-115.73 %18.92 %
Ancient paraloguesEukaryotes (Eukaryota)

Os07g0602200 

No description
7:24,592,035-24,598,353:116.55 %22.20 %
Paraloguescommelinids

Os02g0214900 

OJ1006_D05.27-2
No description
2:6,424,577-6,430,587:-175.10 %73.94 %
Paraloguescommelinids

Os02g0215200 

HDAC2
No description
2:6,447,078-6,453,167:176.42 %75.10 %
ParaloguesEukaryotes (Eukaryota)

Os04g0409600 

No description
4:20,250,090-20,255,721:144.68 %16.22 %