Summary
Sequence
Protein Information
- Protein summary
- Domains & features
- Variants
- PDB 3D protein model
- AlphaFold predicted model
Genetic Variation
- Variant table
- Variant image
- Population comparison
- Comparison image
External References
- General identifiers
- Oligo probes
Supporting evidence
ID History
- Transcript history
- Protein history

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Ensembl Plants is produced in collaboration with Gramene

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Transcript: ORUFI11G20440.1

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Location

Chromosome 11: 23,027,805-23,033,988 forward strand.

About this transcript

This transcript has 4 exons, is annotated with 39 domains and features and maps to 54 oligo probes.

Gene

This transcript is a product of gene ORUFI11G20440 Show transcript tableHide transcript table

Name	Transcript ID	bp	Protein	Biotype	UniProt	Flags
-	ORUFI11G20440.2	2570	855aa	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A0E0RAL9	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical,
-	ORUFI11G20440.1	3763	813aa	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A0E0RAL8	-

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Exons

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Download sequence

Exons/ Introns

Translated sequence
Flanking sequence
Intron sequence
UTR

Markup

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No.	Exon / Intron	Start	End	Start Phase	End Phase	Length	Sequence
	5' upstream sequence						..........aatgacgttatcagaggagactcatcccacccgatcggcatagtcgtctc
1	ORUFI11G20440.1.exon1	23,027,805	23,028,061	-	-	257	CAGACTCCATCCCTTCCCCCCTTTTTTTTTGCCTCTCTTCTCACCGTGCCAAAACCCTAG AGCTCTCCTCCCTCCTCTGTACTCACCTTCCGGCGGCGCACCAGGCGGGCTCGAGGGCGG AGTGGGAGACGGGCGGCGACTCCGGGCGGCCGCGGGCGGCGGCGAGGGCGGGGACTCTCC TGGCGGCCCAGTCGGCAAGGACGTAGGGGGCAGCGAGCAGACCAATTTTTTCTCCTTCCA CTCCTCTTCAAATCAAG
	Intron 1-2	23,028,062	23,028,671			610	gtatactacaaatctgagcatacta..........gccattaatgtgcttaggggataag
2	ORUFI11G20440.1.exon2	23,028,672	23,028,711	-	-	40	GCGACGACATGCCCCTCCGTGGGCTGTTCTCGCGCCATAT
	Intron 2-3	23,028,712	23,029,796			1,085	gtatttatttatggggggaggcagg..........aggtctcctttttacccctatccag
3	ORUFI11G20440.1.exon3	23,029,797	23,032,384	-	-	2,588	CTTAACCTAAACTATGACTGGTAAACAAACCTAGAGAAGATACAAAGGAAATAACGGCAT AAACTTTTGTTTTGCAAAAGATTAACAGTGGCTTACCATGGCTGGAACTCGGCAGACAAC TTCAGTTCCGATGGATAATGCAGCAGTTGTTGATGCAAAACCCTTGCGCACATTGACTCC CATGTTCCCTGCGGCACTTGGTCTGCACACTTTCACTGCTAAAGAAAACTCATCTTCGAT TGTCTGTATTACCCCGTTTGGACCATATGCTGGGGGCACTGAACAGGCAATGCCTGCTAG TATTCCACCAATGTTTGCATCACCGGCTGCCCCTGCAGACCCCAACCAGAGGCAGCCATA TGCTGTTCACTTGAATGGAGCTGCTCCTGCTAACGGTACAGCAAACAACACAGGGGTCAT CCCTGATTTGCAAATAGCTGTGGCAGGTACAGTGGAATCTGCTAAGAGGAAGAGGGGCAG ACCCAAGCGCGTGCAAGATTCTTCTGTTCCTTCAGCTCATTTGGTTCCTTCAGCTCCAGG AGGTAACATCACTGCTGTCCAGACGCCTCCTTCAGCAACCACAGATGAATCTGGTAAGAA GAAGAGGGGACGGCCCAAGCGGGTACAAGATGTACCTGTCCTGTCAACTCCTTCAGCTCC TCAGGTAGATAGTACAGTTTTTCAGACACCTGCTTCTGCTGTAAATGAATCTGTTACGAG GAAAAGGGGACGACCCAGGCGTGTACAGGATGGTGCAGATACTTCAGCTCCTCCAATTCA ATCAAAATATAATGAGCCTGTTTTGCAGACACCTTCTGCTGTCACCTTACCAGAAGATGG TAAGAGGAAGAGAGGGCGGCCAAAGCGTGTGCCTGATGGTGCACTGATTCCTTTAAGTCA CTCAGGTGTTTCGATAGATGATGACAGTGGTGAAATAATAACAGGGAAACGTGGACGGCC TAGGAAAATTGATGTCAATCTTCTGAATCTGCCATCTTTGTTTTCAGATGATCCTAGGGA ATCTGTTGATAATGTACTCATGATGTTTGATGCACTGCGGCGGAGGCTCATGCAGTTGGA TGAGGTGAAGCAAGGAGCAAAGCAGCAACATAACTTAAAGGCCGGGAGTATCATGATGAG TGCTGAACTTCGTGCAAATAAGAACAAGAGGATTGGAGAGGTTCCAGGTGTCGAGGTTGG TGATATGTTCTACTTCAGAATAGAGATGTGTCTGGTTGGACTGAATAGTCAGAGCATGTC TGGGATTGATTACATGTCTGCTAAGTTTGGTAATGAGGAGGATCCTGTGGCTATCAGTAT CGTGTCAGCTGGTGTGTATGAGAATACCGAAGATGACCCAGATGTGCTGGTTTACACTGG ACAGGGCATGTCTGGAAAGGATGACCAAAAGCTTGAAAGAGGTAATCTTGCACTTGAAAG GAGTTTGCATAGAGGTAATCAAATCAGAGTTGTTCGTAGTGTAAGAGATTTGACTTGTCC TACTGGTAAGATATACATTTATGATGGCCTTTATAAAATAAGAGAAGCATGGGTGGAGAA AGGAAAAACTGGCTTTAATGTGTTTAAACACAAGCTGCTCAGAGAACCTGGTCAACCTGA TGGCATAGCAGTGTGGAAGAAGACTGAAAAATGGAGGGAGAATCCTTCCTCTCGAGACCA TGTTATATTGCGTGACATATCATATGGTGCAGAAAGCAAGCCTGTTTGCCTTGTGAATGA AGTGGATGATGAGAAAGGTCCTAGCCACTTCAACTACACAACTAAACTGAACTACAGGAA TTCTCTCAGCTCAATGAGAAAGATGCAAGGCTGCAATTGCGCAAGTGTGTGCCTTCCTGG TGATAACAACTGCTCTTGCACTCATCGAAATGCCGGTGATCTTCCATACAGTGCTTCAGG CATACTTGTTAGCCGGATGCCTATGCTGTATGAGTGTAACGATTCCTGTACATGCTCACA TAATTGCCGGAACCGAGTTGTACAGAAAGGTTCTCAGATCCACTTTGAGGTGTTTAAGAC AGGAGATCGAGGTTGGGGACTTCGTAGTTGGGATCCAATTCGGGCAGGCACATTTATTTG TGAATATGCAGGAGAAGTTATTGACAGAAACAGTATCATTGGAGAAGATGATTACATCTT TGAGACACCGTCTTCTGAGCAGAATTTAAGATGGAACTATGCACCAGAATTACTGGGTGA ACCCAGTCTTTCTGACTCAAGTGAGACACCTAAGCAACTGCCAATAATTATCAGTGCAAA ACGAACTGGAAACATAGCTCGCTTTATGAACCACAGCTGCTCACCAAATGTTTTTTGGCA ACCAGTTTTGTATGATCATGGTGACGAGGGATATCCACATATCGCATTCTTTGCAATCAA GCATATTCCTCCGATGACAGAGCTTACATATGATTATGGTCAGAGCCAGGGTAATGTTCA ACTGGGAATCAATTCTGGATGTCGGAAGTCCAAAAACTGCTTATGTTGGTCTCGCAAGTG CAGAGGTTCCTTTGGCTAAAATGCGAACCCTGCAACAAAAACATTAAAGCATAATCTGCC ATTGCAAG
	Intron 3-4	23,032,385	23,033,110			726	gtgagtcattggatgttttctcatt..........cctttttggcacattttgcctgtag
4	ORUFI11G20440.1.exon4	23,033,111	23,033,988	-	-	878	ATCCATGTCGATTAACAGATATTGGCAATGTATTCCATCTCCATTCTGACAAATTGAACT GTCCTTACCTACAGAAGTAGGCGATTGTTGTAGAACTATGAAGCAGCAGGGTGCATTCAG TGTTTCAAGATGCCATGTAATAAGGTTGGCCTTCGTCTGGATGAGAATGCAAAAGAGGGT ATTTATTGCAGAAAGCATTGGCATTGTACCAAACTTTATTGGAATAACTAGTATTTAGCG TAGCATCTGAATTCCGAGAAGGTTGGAACCGTGTTACTATGTTCTTGTAGTGTAGTTGTT TCTCCTGTTTAAGAGAACTTTACCAACTGTAGAATGCCATGCGTATGGTTGCATCGCAAG ATTTTCCTGGGCTTCGCATGCCAGTCGTGCACTCGCCGTATGTTTTTCTGTAATATTAAT GGCTACATAATGCATCCTGTAATAATCATGGTAGTAGCTCCAGTCATCTGCTGAGGTTGA AATGATACAGAGACCTGTTGCATATGGTGATTATGCTGTTAGCTGATATCTGCCTCAGTA AACCAGCAGGTCACATGATAGCGTATACTAGTAGTATATTGTTTGTTTTGCAGCAAAGCA TACCTGATATCTATCTCTTCATCAGGTGAATCAGTTGTATGCAGCAGCTGAACCATTGCA GGATTGATTTGATTTCTTTAGATGCCCTGGTCATGGTAATTCCTCCTGCACTGAGCAATT TGCAAAGAGCGATGAAATGATAAGAGCAATTGCTTTCAGAGAAAGTTCAGGCCGATATGA TTCTTCAGAGAAATGCATGTTTTGTAGGTAAGCTGCAGTTCTTTTCCTCTTCCCAGATTG ACCGTCTTGCCAGAAACTTAGGCCTGGTTTAGTTTTCA
	3' downstream sequence						actttttcttcaaacttccaatttttccatcacatcaaaacttttctata..........

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