5' upstream sequence
{"url":"/Oryza_rufipogon/Component/Transcript/Exons/exons?g=ORUFI07G13690;r=70X0P+014060241-14065363;t=ORUFI07G13690.1;db=core;time=1755209408078.078;adorn=only","provisional":{"ref":{"style":[[0,""],[0,"color:#008000"]]},"legend":{"_messages":[],"exons/Introns":{"flanking":{"default":null,"label":"#008000","text":"Flanking sequence","class":"ef"}}},"seq":[{"style":[1]}],"expect":[],"flourishes":{}}}
..........attgttgccattgattattttccttctcaaagttacagccacgtttagaa
1 ORUFI07G13690.1.exon1 14,060,241 14,061,079 - 2 839
{"provisional":{"ref":{"style":[[0,""],[0,"color:#1044ee"],[7,"cd6839"]]},"legend":{"_messages":[],"exons/Introns":{"flanking":{"class":"ef","default":null,"label":"#008000","text":"Flanking sequence"},"exon1":{"class":"e1","default":null,"text":"Translated sequence","label":"#1044ee"},"utr":{"default":null,"label":"#cd6839","text":"UTR","class":"eu"}}},"expect":[],"seq":[{"style":[2]},-4,{"style":[2,-41,1]},{"style":[1]},-6,{"style":[1,-58,0]}],"flourishes":{}},"url":"/Oryza_rufipogon/Component/Transcript/Exons/exons?g=ORUFI07G13690;r=70X0P+014060241-14065363;t=ORUFI07G13690.1;db=core;time=1755209408078.078;adorn=only"}
CCCGTGATTCCTTTTCGAATATTTACGTGTACATAACAAATTCCTGTAAAATTTCCACAA ATATCTTACTATCAAATCTGGTGTGACCTGTCATCTGAAAAAAGAAAAAACTGCCGTGAC CTGAAATGACAAGTGGACAAAAGACGTGATAAATAAACCCTGCCTAAATGGGAATTAAAC AACAGCCAGCCAGCCAAGCCAGCCAGCGCTGGATGACGACTAGTCCACAACACCACGAGA GCACGAGCAAAAAAAACCCAACTAATTTTCTTTTCTTCTCCTCAAGAAATTGATCAGAAA GAGAGACAAGAGAAGAGCTAGGGTTTCATCTCATCTCCAGCCATGGCGTCCGCCGCCTCC CCGCCGCGCTCCGGCGACGCCTCCCCGTCCTCCCCTCTCCTCCCTTCCCCGACGTCCCCC GACCGCCGCAGCGGCGGCGGCGGAGGCGGAGGACGCCTGCTTCCGGGGCTGCGCGGCGCG GCGCGGTTCCTGGGCCGCACGGGGAGCCGCCGCCTGATGCGGGAGCCGTCGGTGGCGGTG CGGGAGACGGCGGCGGAGCACCTCGAGGAGCGCCAGACCGACTGGGCCTACTCCAAGCCC GTCGTCGTGCTCGACGTGCTCTGGAACCTCGCCTTCGTCGCCGTCGCCGCCGCCGTCCTC GCCGCCTCGCTCCCGGAGTCCCCCTCGGTGCCGCTCCGCGTCTGGCTCGCCGGGTACGTG CTCCAGTGCCTCTTCCACGTCCTCTGCGTCACCGTCGAGTACAGGCGGCGCCGGGAGGCG CGCGGCGGCGGCTTTGGGGCGGACCAGGGGGCTGCGGCTGATGGGGATTTCAAGCTCAG
Intron 1-2 14,061,080 14,062,034 955
{"provisional":{"ref":{"style":[[0,""],[0,"color:#aaaaaa"]]},"legend":{"_messages":[],"exons/Introns":{"flanking":{"default":null,"label":"#008000","text":"Flanking sequence","class":"ef"},"intron":{"class":"ei","default":null,"text":"Intron sequence","label":"#aaaaaa"},"exon1":{"class":"e1","label":"#1044ee","text":"Translated sequence","default":null},"utr":{"label":"#cd6839","text":"UTR","default":null,"class":"eu"}}},"expect":[],"seq":[{"style":[1]}],"flourishes":{}},"url":"/Oryza_rufipogon/Component/Transcript/Exons/exons?g=ORUFI07G13690;r=70X0P+014060241-14065363;t=ORUFI07G13690.1;db=core;time=1755209408078.078;adorn=only"}
gtgagggtttgctcggatcaacccc..........agtgttttatgtatatattgttcag
2 ORUFI07G13690.1.exon2 14,062,035 14,062,154 2 2 120
{"url":"/Oryza_rufipogon/Component/Transcript/Exons/exons?g=ORUFI07G13690;r=70X0P+014060241-14065363;t=ORUFI07G13690.1;db=core;time=1755209408078.078;adorn=only","provisional":{"flourishes":{},"ref":{"style":[[0,""],[0,"color:#1044ee"]]},"legend":{"_messages":[],"exons/Introns":{"flanking":{"class":"ef","default":null,"text":"Flanking sequence","label":"#008000"},"intron":{"default":null,"text":"Intron sequence","label":"#aaaaaa","class":"ei"},"exon1":{"label":"#1044ee","text":"Translated sequence","default":null,"class":"e1"},"utr":{"class":"eu","default":null,"label":"#cd6839","text":"UTR"}}},"seq":[{"style":[1]},-1],"expect":[]}}
TATTGTGAAGCACCTGGAGTCCGCAAACACGATGTTTTCTTTCATATGGTGGATCATTGG GTTCTACTGGATATCTGCAGGTGGCCAAGCTTTGTCCCATGATGCTCCTCAACTTTACTG
Intron 2-3 14,062,155 14,062,250 96
{"url":"/Oryza_rufipogon/Component/Transcript/Exons/exons?g=ORUFI07G13690;r=70X0P+014060241-14065363;t=ORUFI07G13690.1;db=core;time=1755209408078.078;adorn=only","provisional":{"legend":{"_messages":[],"exons/Introns":{"flanking":{"class":"ef","text":"Flanking sequence","label":"#008000","default":null},"intron":{"class":"ei","text":"Intron sequence","label":"#aaaaaa","default":null},"exon1":{"class":"e1","label":"#1044ee","text":"Translated sequence","default":null},"utr":{"class":"eu","default":null,"label":"#cd6839","text":"UTR"}}},"expect":[],"seq":[{"style":[1]}],"ref":{"style":[[0,""],[0,"color:#aaaaaa"]]},"flourishes":{}}}
gtacgcacttagtagctgtggcatg..........tatcttattgcccattattttgcag
3 ORUFI07G13690.1.exon3 14,062,251 14,062,383 2 0 133
{"provisional":{"flourishes":{},"ref":{"style":[[0,""],[0,"color:#1044ee"]]},"legend":{"_messages":[],"exons/Introns":{"flanking":{"class":"ef","label":"#008000","text":"Flanking sequence","default":null},"intron":{"class":"ei","default":null,"label":"#aaaaaa","text":"Intron sequence"},"exon1":{"class":"e1","label":"#1044ee","text":"Translated sequence","default":null},"utr":{"class":"eu","text":"UTR","label":"#cd6839","default":null}}},"seq":[{"style":[1]},-1,{"style":[1,-12,0]}],"expect":[]},"url":"/Oryza_rufipogon/Component/Transcript/Exons/exons?g=ORUFI07G13690;r=70X0P+014060241-14065363;t=ORUFI07G13690.1;db=core;time=1755209408078.078;adorn=only"}
GCTCTCCATTGTGTTTCTGGCATTTGATGTTTTCTTTGTAGTCTTCTGTGTTGCCTTGGC CTGTGTGATTGGCATTGCTGTCTGTTGCTGCCTGCCTTGCATTATTGCTATCTTATATGC TGTAACTGATCAG
Intron 3-4 14,062,384 14,062,951 568
{"url":"/Oryza_rufipogon/Component/Transcript/Exons/exons?g=ORUFI07G13690;r=70X0P+014060241-14065363;t=ORUFI07G13690.1;db=core;time=1755209408078.078;adorn=only","provisional":{"flourishes":{},"legend":{"_messages":[],"exons/Introns":{"flanking":{"default":null,"label":"#008000","text":"Flanking sequence","class":"ef"},"intron":{"class":"ei","default":null,"text":"Intron sequence","label":"#aaaaaa"},"exon1":{"default":null,"text":"Translated sequence","label":"#1044ee","class":"e1"},"utr":{"class":"eu","label":"#cd6839","text":"UTR","default":null}}},"seq":[{"style":[1]}],"expect":[],"ref":{"style":[[0,""],[0,"color:#aaaaaa"]]}}}
gtatgccagttcttgtttaggacag..........agactatttgtttgtttttaagcag
4 ORUFI07G13690.1.exon4 14,062,952 14,063,116 0 0 165
{"provisional":{"ref":{"style":[[0,""],[0,"color:#1044ee"]]},"expect":[],"seq":[{"style":[1]},-1,{"style":[1,-44,0]}],"legend":{"_messages":[],"exons/Introns":{"flanking":{"class":"ef","default":null,"text":"Flanking sequence","label":"#008000"},"intron":{"class":"ei","label":"#aaaaaa","text":"Intron sequence","default":null},"exon1":{"class":"e1","label":"#1044ee","text":"Translated sequence","default":null},"utr":{"text":"UTR","label":"#cd6839","default":null,"class":"eu"}}},"flourishes":{}},"url":"/Oryza_rufipogon/Component/Transcript/Exons/exons?g=ORUFI07G13690;r=70X0P+014060241-14065363;t=ORUFI07G13690.1;db=core;time=1755209408078.078;adorn=only"}
GAAGGAGCATCTGAAGAGGACATCAACAACCTGTCCAAATTCAAATTTCGGACAATGGGT GATGCAGACAAGCTGGTTGCTGGAATTGCAGCACCTGTGGGTGGAGTAATGACTGAGTGT GGCACCAATCCTCCTGTTGAACACTTCCTTTCTGCTGAGGATGCT
Intron 4-5 14,063,117 14,064,373 1,257
{"provisional":{"flourishes":{},"ref":{"style":[[0,""],[0,"color:#aaaaaa"]]},"legend":{"_messages":[],"exons/Introns":{"flanking":{"default":null,"text":"Flanking sequence","label":"#008000","class":"ef"},"intron":{"default":null,"label":"#aaaaaa","text":"Intron sequence","class":"ei"},"exon1":{"class":"e1","label":"#1044ee","text":"Translated sequence","default":null},"utr":{"class":"eu","default":null,"label":"#cd6839","text":"UTR"}}},"seq":[{"style":[1]}],"expect":[]},"url":"/Oryza_rufipogon/Component/Transcript/Exons/exons?g=ORUFI07G13690;r=70X0P+014060241-14065363;t=ORUFI07G13690.1;db=core;time=1755209408078.078;adorn=only"}
gtaagttttcagtttcccccctgaa..........ccactcttgtacctgtcaaatgcag
5 ORUFI07G13690.1.exon5 14,064,374 14,065,363 0 - 990
{"provisional":{"flourishes":{},"seq":[{"style":[1]},-1,{"style":[1,-50,2]},{"style":[2]},-12,{"style":[2,-29,0]}],"expect":[],"legend":{"_messages":[],"exons/Introns":{"flanking":{"class":"ef","label":"#008000","text":"Flanking sequence","default":null},"intron":{"class":"ei","default":null,"text":"Intron sequence","label":"#aaaaaa"},"exon1":{"class":"e1","default":null,"text":"Translated sequence","label":"#1044ee"},"utr":{"class":"eu","label":"#cd6839","text":"UTR","default":null}}},"ref":{"style":[[0,""],[0,"color:#1044ee"],[7,"cd6839"]]}},"url":"/Oryza_rufipogon/Component/Transcript/Exons/exons?g=ORUFI07G13690;r=70X0P+014060241-14065363;t=ORUFI07G13690.1;db=core;time=1755209408078.078;adorn=only"}
GAGTGCTGCATCTGCTTGTGTCCCTATGAAGACGGTGCGGAACTTCGAGAACTCCCCTGC AATCATCATTTCCACTGTACCTGCATAGACAAGTGGCTTCACATAAATGCAACATGTCCC CTGTGCAAGTTCAACATCATCAAGAGCAACCTTGGTCCAGAAGACGTCTAGGTTTCACAG GACGAGCAATCTGTTGAAGGATTGATATGCTCCAGTTGCGTTCTTTAGCTATGGGTTCCT TCAGGTGTAAGTATGGGGTATAGGTGATGCACAGCTGGTTGATCAGTATTCGCTCCTGAA TGAAATGTTTTAGCAGTTTCTTGATGCCGGTAGAGATGTACATTCCTTCTCTCTAAGTCA ATTGTGTCGCAGATTCTCATTTTAGCCTTGTAGGAAGTATTTGAATTGAGGATTCTCATG TACGTTGTGTTAGCAAGTGTTGAATAAATACATGGAAATGCAGAGGTTTGTAAGAAGAAA AATGGTTGTGGAATTGGAGCTTTGTTAACAGCACATGCTGTCTCCTTAATATGCAGTAGA CGTACATTCTACCCCTTTGGTGATTGATACCCTTGTCTGCAATCCTGTTGAAGCAAATTT TGCACTTTGTTCGATGATGTTTAAGCGACAGCTGGAAATTAGAAAGGCAGAGTATGACGG TAAGCAACGCAGCCTTAATCTTTCACCGTCTCAAATCAGAGCAATTCGATATTTCCAGCA AGCTGTGTAATTACTGCTTAGGGGGTACAAACTGCGAATTTGGCTGATAATTACAGCGTT TAACTTATTCCGTCAATGCAATGGTACCCAATATACTCTACATGTTAAACGTGTAAATTG CACACCACAAATACAGTTATTGCTACCAATCCATGCAATTGATATTCACAGGCTCGCCAC GGGCATGATGTAGAAGGTGGCTCGAGACGTGTAGCAGAGCTTATTGGTGCCCTTGAGCCT AAACTCAACCGTAGTAACCACCACGGATCT
3' downstream sequence
{"url":"/Oryza_rufipogon/Component/Transcript/Exons/exons?g=ORUFI07G13690;r=70X0P+014060241-14065363;t=ORUFI07G13690.1;db=core;time=1755209408078.078;adorn=only","provisional":{"flourishes":{},"ref":{"style":[[0,""],[0,"color:#008000"]]},"seq":[{"style":[1]}],"expect":[],"legend":{"_messages":[],"exons/Introns":{"flanking":{"class":"ef","label":"#008000","text":"Flanking sequence","default":null},"intron":{"class":"ei","default":null,"label":"#aaaaaa","text":"Intron sequence"},"exon1":{"text":"Translated sequence","label":"#1044ee","default":null,"class":"e1"},"utr":{"default":null,"text":"UTR","label":"#cd6839","class":"eu"}}}}}
gcccttcctgagtatctgcgcttcgacttccacttcagactgtatcaaca..........
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