5' upstream sequence
{"url":"/Oryza_rufipogon/Component/Transcript/Exons/exons?g=ORUFI06G28670;r=60X0P+026633904-26646338;t=ORUFI06G28670.1;db=core;time=1755248007223.223;adorn=only","provisional":{"ref":{"style":[[0,""],[0,"color:#008000"]]},"legend":{"exons/Introns":{"flanking":{"label":"#008000","class":"ef","default":null,"text":"Flanking sequence"}},"_messages":[]},"flourishes":{},"expect":[],"seq":[{"style":[1]}]}}
..........gtgtttggcagctgatgatggtgataagttgatgcgttgatgggtataag
1 ORUFI06G28670.1.exon1 26,646,338 26,646,169 0 2 170
{"provisional":{"ref":{"style":[[0,""],[0,"color:#1044ee"]]},"legend":{"exons/Introns":{"exon1":{"label":"#1044ee","class":"e1","text":"Translated sequence","default":null},"flanking":{"class":"ef","default":null,"text":"Flanking sequence","label":"#008000"}},"_messages":[]},"expect":[],"flourishes":{},"seq":[{"style":[1]},-1,{"style":[1,-49,0]}]},"url":"/Oryza_rufipogon/Component/Transcript/Exons/exons?g=ORUFI06G28670;r=60X0P+026633904-26646338;t=ORUFI06G28670.1;db=core;time=1755248007223.223;adorn=only"}
ATGAAGCAGGGGCAAGGGGCTCACCTCTCTGGGCAGAGGATAGGCCATCATCCTACTGCG CAGATGAATCCGGGCGATGGCGATGGCAATGGGCGGCAGCAGGTCGCTTCAGGTCATGCT AGTGCGGATCCTGAGTTAATGAACTTGCGTATACGCATGACCAACATGTT
Intron 1-2 26,646,168 26,646,034 135
{"url":"/Oryza_rufipogon/Component/Transcript/Exons/exons?g=ORUFI06G28670;r=60X0P+026633904-26646338;t=ORUFI06G28670.1;db=core;time=1755248007223.223;adorn=only","provisional":{"seq":[{"style":[1]}],"legend":{"exons/Introns":{"intron":{"class":"ei","text":"Intron sequence","default":null,"label":"#aaaaaa"},"flanking":{"label":"#008000","class":"ef","default":null,"text":"Flanking sequence"},"exon1":{"label":"#1044ee","class":"e1","text":"Translated sequence","default":null}},"_messages":[]},"expect":[],"flourishes":{},"ref":{"style":[[0,""],[0,"color:#aaaaaa"]]}}}
gtaagctctctcatgttgcccatct..........aacgttttcaatttaacaattgtag
2 ORUFI06G28670.1.exon2 26,646,033 26,645,922 2 0 112
{"provisional":{"legend":{"exons/Introns":{"intron":{"label":"#aaaaaa","text":"Intron sequence","default":null,"class":"ei"},"flanking":{"label":"#008000","class":"ef","text":"Flanking sequence","default":null},"exon1":{"label":"#1044ee","default":null,"text":"Translated sequence","class":"e1"}},"_messages":[]},"flourishes":{},"expect":[],"seq":[{"style":[1]},{"style":[1,-51,0]}],"ref":{"style":[[0,""],[0,"color:#1044ee"]]}},"url":"/Oryza_rufipogon/Component/Transcript/Exons/exons?g=ORUFI06G28670;r=60X0P+026633904-26646338;t=ORUFI06G28670.1;db=core;time=1755248007223.223;adorn=only"}
GATTTGGGAGTTACTTTCAAGGGAACCTAAGCTTCAAACAAGGCCTAGAAAACTGGTGTC AGACTTGGCAAAACGGTTTGAGGCAGTTATATACAAGAAGAATCCAAATAAG
Intron 2-3 26,645,921 26,643,685 2,237
{"url":"/Oryza_rufipogon/Component/Transcript/Exons/exons?g=ORUFI06G28670;r=60X0P+026633904-26646338;t=ORUFI06G28670.1;db=core;time=1755248007223.223;adorn=only","provisional":{"ref":{"style":[[0,""],[0,"color:#aaaaaa"]]},"legend":{"exons/Introns":{"intron":{"label":"#aaaaaa","text":"Intron sequence","default":null,"class":"ei"},"flanking":{"text":"Flanking sequence","default":null,"class":"ef","label":"#008000"},"exon1":{"label":"#1044ee","text":"Translated sequence","default":null,"class":"e1"}},"_messages":[]},"flourishes":{},"expect":[],"seq":[{"style":[1]}]}}
gtaatccagatttcttttacttatt..........ttaccaacctatctattttgatcag
3 ORUFI06G28670.1.exon3 26,643,684 26,643,477 0 1 208
{"url":"/Oryza_rufipogon/Component/Transcript/Exons/exons?g=ORUFI06G28670;r=60X0P+026633904-26646338;t=ORUFI06G28670.1;db=core;time=1755248007223.223;adorn=only","provisional":{"expect":[],"legend":{"exons/Introns":{"intron":{"class":"ei","default":null,"text":"Intron sequence","label":"#aaaaaa"},"flanking":{"label":"#008000","text":"Flanking sequence","default":null,"class":"ef"},"exon1":{"default":null,"text":"Translated sequence","class":"e1","label":"#1044ee"}},"_messages":[]},"flourishes":{},"seq":[{"style":[1]},-2,{"style":[1,-27,0]}],"ref":{"style":[[0,""],[0,"color:#1044ee"]]}}}
GCTGCCTACTATAGTATATTGAATGGAGAAATCTTTCCACATCTACAACATGCTCTTAGT ACCCATATGGCTCAACATCAGCAAGGTCAACAAATGCTGCAGCAATTAACATCTTCTTCC AGTTATGGCACAACAATTCCAATACCTGATGTGGTTCAGAATGCAAGTGGAAATACTAGA GCGCTCTATGAGATGGACAACACAAGTG
Intron 3-4 26,643,476 26,643,341 136
{"provisional":{"legend":{"exons/Introns":{"intron":{"text":"Intron sequence","default":null,"class":"ei","label":"#aaaaaa"},"flanking":{"default":null,"text":"Flanking sequence","class":"ef","label":"#008000"},"exon1":{"label":"#1044ee","default":null,"text":"Translated sequence","class":"e1"}},"_messages":[]},"flourishes":{},"expect":[],"seq":[{"style":[1]}],"ref":{"style":[[0,""],[0,"color:#aaaaaa"]]}},"url":"/Oryza_rufipogon/Component/Transcript/Exons/exons?g=ORUFI06G28670;r=60X0P+026633904-26646338;t=ORUFI06G28670.1;db=core;time=1755248007223.223;adorn=only"}
gtaactcgaatatatgtacttggct..........tgtacttaacatacgccgcttgcag
4 ORUFI06G28670.1.exon4 26,643,340 26,642,831 1 1 510
{"url":"/Oryza_rufipogon/Component/Transcript/Exons/exons?g=ORUFI06G28670;r=60X0P+026633904-26646338;t=ORUFI06G28670.1;db=core;time=1755248007223.223;adorn=only","provisional":{"ref":{"style":[[0,""],[0,"color:#1044ee"]]},"expect":[],"legend":{"exons/Introns":{"intron":{"label":"#aaaaaa","text":"Intron sequence","default":null,"class":"ei"},"flanking":{"label":"#008000","class":"ef","default":null,"text":"Flanking sequence"},"exon1":{"default":null,"text":"Translated sequence","class":"e1","label":"#1044ee"}},"_messages":[]},"flourishes":{},"seq":[{"style":[1]},-7,{"style":[1,-29,0]}]}}
GTCCCATGTCTAACGGACACCACCACTTCTCCGCCAATTTCCCACTACATTCCACCACTA AGGGTGCCTCATTAGAGATGAGTGCAGTGAGCATGCAAGAAGGGAAGATAACCCATATGA TCCCGACACCAGGATCTAGCAATCAACAAAGTTTACCTGGCAATTTTCATTATTCAACTG GAACTGGATACTTGAATGGGAAATCAAACGTCATGGCACAAATGCAGGAGCAGCAGGCGC CATTTGCTAGTAAAATTAATTGCTGTCCAGTGCAGCGTGATCTTGGTGGCTATGCTGGTT CTGGGGTACATTCTGACATACTGAACAATTCATCCCCGTATGGTGTATCGGAAGCACATA TGATTGATGGTATGGGGTTACATAGGTCAAATGTGCAGGTCATAAACAGAACTGTGGTAC CAGAAACATTCATTAACCCATCTCCTTATGGAATTTCCCCCAATAAACCTTTGCAGCGAC ATGTCAATCCTTCTACACGGAGTACACCAA
Intron 4-5 26,642,830 26,641,296 1,535
{"url":"/Oryza_rufipogon/Component/Transcript/Exons/exons?g=ORUFI06G28670;r=60X0P+026633904-26646338;t=ORUFI06G28670.1;db=core;time=1755248007223.223;adorn=only","provisional":{"ref":{"style":[[0,""],[0,"color:#aaaaaa"]]},"flourishes":{},"legend":{"exons/Introns":{"intron":{"default":null,"text":"Intron sequence","class":"ei","label":"#aaaaaa"},"flanking":{"label":"#008000","class":"ef","text":"Flanking sequence","default":null},"exon1":{"label":"#1044ee","class":"e1","default":null,"text":"Translated sequence"}},"_messages":[]},"expect":[],"seq":[{"style":[1]}]}}
gtaagatttccatatatgtgtatgc..........tgaattatgttgtttctttttacag
5 ORUFI06G28670.1.exon5 26,641,295 26,639,611 1 0 1,685
{"url":"/Oryza_rufipogon/Component/Transcript/Exons/exons?g=ORUFI06G28670;r=60X0P+026633904-26646338;t=ORUFI06G28670.1;db=core;time=1755248007223.223;adorn=only","provisional":{"seq":[{"style":[1]},-27,{"style":[1,-4,0]}],"legend":{"exons/Introns":{"intron":{"label":"#aaaaaa","text":"Intron sequence","default":null,"class":"ei"},"flanking":{"label":"#008000","default":null,"text":"Flanking sequence","class":"ef"},"exon1":{"class":"e1","text":"Translated sequence","default":null,"label":"#1044ee"}},"_messages":[]},"expect":[],"flourishes":{},"ref":{"style":[[0,""],[0,"color:#1044ee"]]}}}
CTCCTGCAGATATAGCTGCCTCTACAAGTTTTAATGGCACCGGTTCTTCTGCCTTATCAA CTACGAGTTATCTAGATATGACTACTGTAAATTCGCTGCCTAAATCAAGAATGGATTCTG GGTTGATTATGAGTCAGCCAACCATCCAGTCCTTTCAAACAGAGTATTATATACAAACTG AAGGATTGGATCTGCAAGAAAAGATTTCTCTTGAACAGCTGCATCAGCAGGTGAATCAGC TGCATCTTATTCAGCCTCATTCCCAGTATGCGCAGAACCAATGTAGCTTAAAGCTCCAGC AGCAAAATTCACTGCATCATCTTGTTATGTCGAGGGGAAATGTATTGACGCAATGCCATC TTGGTTCTGATCATGCTGAGAAACTATTGGACAAGAGAAATCAATTGCACAGTGAACTGG TGTCTTCACAAATAAACGAGCATGTTGGCCTGACAAATCTCCAGGGCCATTATGAGCAAA CACAATATCATGATAATTACAAAAAGGGCCAAATGTCTGCCAGTTCTCAGAACCTTGGTA TCCCAGCCCCTCATGATTTGTTGCCTCCACAACAGCAATTCGATGATGGTTCATACCGTC TGAGTTGTTTCTTGAAAGAAACATACACTAAACCATTGCAACCACATTGTAAATCAAAAC CAATGAAAGAAGTGATCATGACTAGTTTGCTGAGTGGAAAGATCCAGGATGGTTTTTGTC AGAAAAAAATGGCACGAGATAGAGAACATCATCCTATTATATCTGGTTGGCACAGTGCTG GCTGCGCTGCGACTTCATTTGGATCTGAAGAAGTCATGGAAAACACTAAACAATACCATG CCCAGGCACGTTGGTTACTATTTTTGTTCCATGCAAAATCATGTACATCTCCTCCAGGAA GTTGTAAATCTTCATATTGTGATCGTGTACGGGAGTTAGTGGTTCATTTGACGGACTGTC AAATAAAGGACTGTCCATATCGACACTGTAGGGAGTCAAAGATGGTATCTGATCACTATA AGAATTGTATTAACGAGCATTGTCATGTTTGCTGCAAAGCAAAAGAAATGTTGCGTCGCT CTTCTGAACTGGCACATAAACAGAATCCTGCTGAACCTATACTTATTACTCAGCACAATA TGAATCAAAGAAGTGCCGATAGGGTACATGGTGATAGAATGGACATTGACCAGGCAGTTG AAACCTTTGATGACCAACCACCAGCAGCAAAGCGTCCAAAGTTGCAGCTTGTGTCTCCCG ATGCATCTGAGAATGTCCCTGTCTGTCAAAAAAACCCAGGGTTTATGTTGCAGGAAGCCC ATCCTAGACAGCTTGATCAGAACAAAAAGATGGTCCCTGATCAAGAGGTAGACGTGGGGC TTGATATCCGACATCCACAAGTTACTTTAGTCAGCTGTCATGGTAGTGATGAGAAAATTG GTGCTGCGCAAAATACTGTTATTCCTGGTGCTTTAAACAAGATACATTGTCATGTCCAGC AAGAAACTGTTGTGGCTGATAAAGAGAGTGTGACTGCTGTTGATGTTAAGAAAAAAACAG GCTCTGTGGATGTCACGATCTCCAAAACTGGGAAACCAAAGGTAAAAGGTGTTTCACTCA TGGAATTGTTTACTCCAGAACAAATACATGAACACATCAACGGTCTAAGGCAGTGGATTG GTCAG
Intron 5-6 26,639,610 26,639,163 448
{"url":"/Oryza_rufipogon/Component/Transcript/Exons/exons?g=ORUFI06G28670;r=60X0P+026633904-26646338;t=ORUFI06G28670.1;db=core;time=1755248007223.223;adorn=only","provisional":{"legend":{"exons/Introns":{"intron":{"text":"Intron sequence","default":null,"class":"ei","label":"#aaaaaa"},"flanking":{"label":"#008000","default":null,"text":"Flanking sequence","class":"ef"},"exon1":{"text":"Translated sequence","default":null,"class":"e1","label":"#1044ee"}},"_messages":[]},"expect":[],"flourishes":{},"seq":[{"style":[1]}],"ref":{"style":[[0,""],[0,"color:#aaaaaa"]]}}}
gtatgcttcttgacctggacaaaat..........tatacctgattctataatttgacag
6 ORUFI06G28670.1.exon6 26,639,162 26,638,866 0 0 297
{"url":"/Oryza_rufipogon/Component/Transcript/Exons/exons?g=ORUFI06G28670;r=60X0P+026633904-26646338;t=ORUFI06G28670.1;db=core;time=1755248007223.223;adorn=only","provisional":{"ref":{"style":[[0,""],[0,"color:#1044ee"]]},"seq":[{"style":[1]},-3,{"style":[1,-56,0]}],"legend":{"exons/Introns":{"intron":{"label":"#aaaaaa","class":"ei","default":null,"text":"Intron sequence"},"flanking":{"label":"#008000","text":"Flanking sequence","default":null,"class":"ef"},"exon1":{"label":"#1044ee","text":"Translated sequence","default":null,"class":"e1"}},"_messages":[]},"expect":[],"flourishes":{}}}
AGTAAGGCTAAAGCTGAAAAGAATCAAGTGATAGGATATTCTGAAAGTGAGAGCTTATGC CAGCTTTGCAAAGTTGAAAACCTTACGTTTGAACCTCGACCAATATATTGTTCTCCTTGT GGTGCTCGGATAAAACGAAATGCATCATATTATACTGGGTCTACTGCTATGGGTCGCCTT TTTTTCTGTATCTCGTGTTACAATGCATCTCTGGGCAACACAATTGAGGTGGAGCTTATT AAACTCTCAAAAGCAGATCTTGAGAAAAAGAGAAACAGTGACGAACCAGAGGAAGGG
Intron 6-7 26,638,865 26,638,776 90
{"provisional":{"ref":{"style":[[0,""],[0,"color:#aaaaaa"]]},"flourishes":{},"legend":{"exons/Introns":{"intron":{"text":"Intron sequence","default":null,"class":"ei","label":"#aaaaaa"},"flanking":{"default":null,"text":"Flanking sequence","class":"ef","label":"#008000"},"exon1":{"class":"e1","default":null,"text":"Translated sequence","label":"#1044ee"}},"_messages":[]},"expect":[],"seq":[{"style":[1]}]},"url":"/Oryza_rufipogon/Component/Transcript/Exons/exons?g=ORUFI06G28670;r=60X0P+026633904-26646338;t=ORUFI06G28670.1;db=core;time=1755248007223.223;adorn=only"}
gtaagcactttctccttctgttagg..........ttgttcctattgattggatctacag
7 ORUFI06G28670.1.exon7 26,638,775 26,638,497 0 0 279
{"provisional":{"ref":{"style":[[0,""],[0,"color:#1044ee"]]},"legend":{"exons/Introns":{"intron":{"class":"ei","default":null,"text":"Intron sequence","label":"#aaaaaa"},"flanking":{"label":"#008000","text":"Flanking sequence","default":null,"class":"ef"},"exon1":{"default":null,"text":"Translated sequence","class":"e1","label":"#1044ee"}},"_messages":[]},"expect":[],"flourishes":{},"seq":[{"style":[1]},-3,{"style":[1,-38,0]}]},"url":"/Oryza_rufipogon/Component/Transcript/Exons/exons?g=ORUFI06G28670;r=60X0P+026633904-26646338;t=ORUFI06G28670.1;db=core;time=1755248007223.223;adorn=only"}
TGGGTTCAGTGTGACAAATGTGAATGCTGGCAACATCAGATCTGTGCACTTTTCAATGCC AGAAGAAATGATGTTGAAGAAGCAGAATACACTTGCTTCAAATGTTATATTGAGGAGTTT AAACGTGGTTTGCGCATGCCTTTACCAGAGAGTGTTGTTCGTGGTGCCAAAGATCTGCCA AGGACCCTGCTTAGCGATCATATAGAAGAACGACTTTTTAAACGACTCAGGGAGGAGAGA CAGGAACGGGCAAATAAGTTAAAGACAAGTTTGGATGAG
Intron 7-8 26,638,496 26,638,158 339
{"provisional":{"seq":[{"style":[1]}],"expect":[],"legend":{"exons/Introns":{"intron":{"label":"#aaaaaa","default":null,"text":"Intron sequence","class":"ei"},"flanking":{"label":"#008000","class":"ef","text":"Flanking sequence","default":null},"exon1":{"label":"#1044ee","default":null,"text":"Translated sequence","class":"e1"}},"_messages":[]},"flourishes":{},"ref":{"style":[[0,""],[0,"color:#aaaaaa"]]}},"url":"/Oryza_rufipogon/Component/Transcript/Exons/exons?g=ORUFI06G28670;r=60X0P+026633904-26646338;t=ORUFI06G28670.1;db=core;time=1755248007223.223;adorn=only"}
gttagtgtgactataatttgttccg..........actcctaattttcccaccatgttag
8 ORUFI06G28670.1.exon8 26,638,157 26,638,029 0 0 129
{"url":"/Oryza_rufipogon/Component/Transcript/Exons/exons?g=ORUFI06G28670;r=60X0P+026633904-26646338;t=ORUFI06G28670.1;db=core;time=1755248007223.223;adorn=only","provisional":{"ref":{"style":[[0,""],[0,"color:#1044ee"]]},"legend":{"exons/Introns":{"intron":{"class":"ei","default":null,"text":"Intron sequence","label":"#aaaaaa"},"flanking":{"class":"ef","text":"Flanking sequence","default":null,"label":"#008000"},"exon1":{"label":"#1044ee","class":"e1","text":"Translated sequence","default":null}},"_messages":[]},"expect":[],"flourishes":{},"seq":[{"style":[1]},-1,{"style":[1,-8,0]}]}}
GTTCCTGGAGCAGATGGACTTGTGGTCAGAGTTGTTTCATCAGTGGACAAGAAACTGGAA GTTAAACCACGTTTTTTCAAGATTTTGCAAGAGGACAATTATCCAGCTGAGTTCCCTTAC AAGTCTAAG
Intron 8-9 26,638,028 26,637,883 146
{"provisional":{"seq":[{"style":[1]}],"flourishes":{},"legend":{"exons/Introns":{"intron":{"label":"#aaaaaa","text":"Intron sequence","default":null,"class":"ei"},"flanking":{"class":"ef","text":"Flanking sequence","default":null,"label":"#008000"},"exon1":{"label":"#1044ee","text":"Translated sequence","default":null,"class":"e1"}},"_messages":[]},"expect":[],"ref":{"style":[[0,""],[0,"color:#aaaaaa"]]}},"url":"/Oryza_rufipogon/Component/Transcript/Exons/exons?g=ORUFI06G28670;r=60X0P+026633904-26646338;t=ORUFI06G28670.1;db=core;time=1755248007223.223;adorn=only"}
gtgagaaagtggtctgatcatttga..........tttaacatttccaaatattttgcag
9 ORUFI06G28670.1.exon9 26,637,882 26,637,682 0 0 201
{"url":"/Oryza_rufipogon/Component/Transcript/Exons/exons?g=ORUFI06G28670;r=60X0P+026633904-26646338;t=ORUFI06G28670.1;db=core;time=1755248007223.223;adorn=only","provisional":{"ref":{"style":[[0,""],[0,"color:#1044ee"]]},"seq":[{"style":[1]},-2,{"style":[1,-20,0]}],"legend":{"exons/Introns":{"intron":{"class":"ei","default":null,"text":"Intron sequence","label":"#aaaaaa"},"flanking":{"class":"ef","text":"Flanking sequence","default":null,"label":"#008000"},"exon1":{"label":"#1044ee","text":"Translated sequence","default":null,"class":"e1"}},"_messages":[]},"flourishes":{},"expect":[]}}
GCTATTCTTTTATTTCAGAAAATAGAAGGTGTGGAAGTATGCTTATTTGGCATGTATGTC CAAGAATATGGTGCAGAATGCAAATTCCCAAACCAACGTCGGGTTTATCTGTCATATCTT GATTCTGTTAAATACTTTAGACCAGATATAGAAACAGTGTCCGGGCAGGCCTTAAGGACA TATGTGTACCATGAAATTCTG
Intron 9-10 26,637,681 26,637,529 153
{"url":"/Oryza_rufipogon/Component/Transcript/Exons/exons?g=ORUFI06G28670;r=60X0P+026633904-26646338;t=ORUFI06G28670.1;db=core;time=1755248007223.223;adorn=only","provisional":{"seq":[{"style":[1]}],"legend":{"exons/Introns":{"intron":{"label":"#aaaaaa","class":"ei","text":"Intron sequence","default":null},"flanking":{"label":"#008000","text":"Flanking sequence","default":null,"class":"ef"},"exon1":{"class":"e1","default":null,"text":"Translated sequence","label":"#1044ee"}},"_messages":[]},"expect":[],"flourishes":{},"ref":{"style":[[0,""],[0,"color:#aaaaaa"]]}}}
gtaattcgctatgcctattgagttc..........atactagttttttttctggatacag
10 ORUFI06G28670.1.exon10 26,637,528 26,637,407 0 2 122
{"provisional":{"seq":[{"style":[1]},-1,{"style":[1,-1,0]}],"flourishes":{},"expect":[],"legend":{"exons/Introns":{"intron":{"text":"Intron sequence","default":null,"class":"ei","label":"#aaaaaa"},"flanking":{"label":"#008000","class":"ef","default":null,"text":"Flanking sequence"},"exon1":{"class":"e1","text":"Translated sequence","default":null,"label":"#1044ee"}},"_messages":[]},"ref":{"style":[[0,""],[0,"color:#1044ee"]]}},"url":"/Oryza_rufipogon/Component/Transcript/Exons/exons?g=ORUFI06G28670;r=60X0P+026633904-26646338;t=ORUFI06G28670.1;db=core;time=1755248007223.223;adorn=only"}
ATAGGTTATCTTGAGTACTGTAAGCAGCGTGGATTCACCAGTTGTTATATATGGGCTTGC CCTCCTGTTAAAGGTGAAGATTACATTTTGTATTGCCATCCAGAGATTCAGAAGACACCA AA
Intron 10-11 26,637,406 26,637,148 259
{"provisional":{"ref":{"style":[[0,""],[0,"color:#aaaaaa"]]},"seq":[{"style":[1]}],"expect":[],"legend":{"exons/Introns":{"intron":{"class":"ei","default":null,"text":"Intron sequence","label":"#aaaaaa"},"flanking":{"class":"ef","text":"Flanking sequence","default":null,"label":"#008000"},"exon1":{"label":"#1044ee","class":"e1","default":null,"text":"Translated sequence"}},"_messages":[]},"flourishes":{}},"url":"/Oryza_rufipogon/Component/Transcript/Exons/exons?g=ORUFI06G28670;r=60X0P+026633904-26646338;t=ORUFI06G28670.1;db=core;time=1755248007223.223;adorn=only"}
gtctgataaactgcgtcagtggtaa..........acgattaatattcctttacacacag
11 ORUFI06G28670.1.exon11 26,637,147 26,636,838 2 0 310
{"url":"/Oryza_rufipogon/Component/Transcript/Exons/exons?g=ORUFI06G28670;r=60X0P+026633904-26646338;t=ORUFI06G28670.1;db=core;time=1755248007223.223;adorn=only","provisional":{"expect":[],"legend":{"exons/Introns":{"intron":{"label":"#aaaaaa","class":"ei","default":null,"text":"Intron sequence"},"flanking":{"label":"#008000","class":"ef","text":"Flanking sequence","default":null},"exon1":{"label":"#1044ee","text":"Translated sequence","default":null,"class":"e1"}},"_messages":[]},"flourishes":{},"seq":[{"style":[1]},-4,{"style":[1,-9,0]}],"ref":{"style":[[0,""],[0,"color:#1044ee"]]}}}
GTACTTATCTATGCTTCAAAAGGCTATTAAGGAGAACATTGTTGTCGAGTTGACAAATCT CTATGATCAATTTTTTGTCACTGCAAAAGAATGCAAGATAAAAGTATCTGCAGCTCGCTT GCCATATTTTGATGGAGATTATTGGCCAGGAGCTGCAGAAGATATTATCAACCAACTTCA ACTAGAGGGTGATGGTAAGCTGCTGAAGAAGGGGAGAGTAAATAAAATTATCACAAAACG AGCTTTAAAAGCTGCCGGCCACACTGATCTAAGTGGGAATGCTTCAAAAGAGGCTATGCT GATGCAAAAA
Intron 11-12 26,636,837 26,636,703 135
{"url":"/Oryza_rufipogon/Component/Transcript/Exons/exons?g=ORUFI06G28670;r=60X0P+026633904-26646338;t=ORUFI06G28670.1;db=core;time=1755248007223.223;adorn=only","provisional":{"seq":[{"style":[1]}],"legend":{"exons/Introns":{"intron":{"class":"ei","default":null,"text":"Intron sequence","label":"#aaaaaa"},"flanking":{"default":null,"text":"Flanking sequence","class":"ef","label":"#008000"},"exon1":{"label":"#1044ee","class":"e1","default":null,"text":"Translated sequence"}},"_messages":[]},"flourishes":{},"expect":[],"ref":{"style":[[0,""],[0,"color:#aaaaaa"]]}}}
gtaatattctttttcatgcagtata..........tagtcatcatcttgattctatgcag
12 ORUFI06G28670.1.exon12 26,636,702 26,636,563 0 2 140
{"url":"/Oryza_rufipogon/Component/Transcript/Exons/exons?g=ORUFI06G28670;r=60X0P+026633904-26646338;t=ORUFI06G28670.1;db=core;time=1755248007223.223;adorn=only","provisional":{"ref":{"style":[[0,""],[0,"color:#1044ee"]]},"seq":[{"style":[1]},-1,{"style":[1,-19,0]}],"flourishes":{},"legend":{"exons/Introns":{"intron":{"label":"#aaaaaa","text":"Intron sequence","default":null,"class":"ei"},"flanking":{"text":"Flanking sequence","default":null,"class":"ef","label":"#008000"},"exon1":{"label":"#1044ee","class":"e1","default":null,"text":"Translated sequence"}},"_messages":[]},"expect":[]}}
CTTGGAGAAATCATTTGCCCAATTAAGGATGATCTCATCATGGTCCATTTGCAGTATTCG TGCAGTCACTGTTGTACCTTTATGGTGTCTGGAAGACGCTGGGTCTGCAATGAACGCAAA AGTTTTTATATTTGTGACAG
Intron 12-13 26,636,562 26,635,421 1,142
{"url":"/Oryza_rufipogon/Component/Transcript/Exons/exons?g=ORUFI06G28670;r=60X0P+026633904-26646338;t=ORUFI06G28670.1;db=core;time=1755248007223.223;adorn=only","provisional":{"seq":[{"style":[1]}],"expect":[],"legend":{"exons/Introns":{"intron":{"text":"Intron sequence","default":null,"class":"ei","label":"#aaaaaa"},"flanking":{"default":null,"text":"Flanking sequence","class":"ef","label":"#008000"},"exon1":{"label":"#1044ee","class":"e1","default":null,"text":"Translated sequence"}},"_messages":[]},"flourishes":{},"ref":{"style":[[0,""],[0,"color:#aaaaaa"]]}}}
gtacattaaattatttcattgtatg..........tgaactgatgagtttgttgttgcag
13 ORUFI06G28670.1.exon13 26,635,420 26,635,342 2 0 79
{"url":"/Oryza_rufipogon/Component/Transcript/Exons/exons?g=ORUFI06G28670;r=60X0P+026633904-26646338;t=ORUFI06G28670.1;db=core;time=1755248007223.223;adorn=only","provisional":{"seq":[{"style":[1]},{"style":[1,-18,0]}],"expect":[],"legend":{"exons/Introns":{"intron":{"default":null,"text":"Intron sequence","class":"ei","label":"#aaaaaa"},"flanking":{"class":"ef","text":"Flanking sequence","default":null,"label":"#008000"},"exon1":{"label":"#1044ee","text":"Translated sequence","default":null,"class":"e1"}},"_messages":[]},"flourishes":{},"ref":{"style":[[0,""],[0,"color:#1044ee"]]}}}
GTGTTATAATGCAGAGCAGCGGCTTGAGGAGAAGGAGAGGCACCCAAGTAATAGTAAATG TTTGCATATACTCCACCCA
Intron 13-14 26,635,341 26,635,244 98
{"provisional":{"seq":[{"style":[1]}],"expect":[],"legend":{"exons/Introns":{"intron":{"label":"#aaaaaa","text":"Intron sequence","default":null,"class":"ei"},"flanking":{"default":null,"text":"Flanking sequence","class":"ef","label":"#008000"},"exon1":{"default":null,"text":"Translated sequence","class":"e1","label":"#1044ee"}},"_messages":[]},"flourishes":{},"ref":{"style":[[0,""],[0,"color:#aaaaaa"]]}},"url":"/Oryza_rufipogon/Component/Transcript/Exons/exons?g=ORUFI06G28670;r=60X0P+026633904-26646338;t=ORUFI06G28670.1;db=core;time=1755248007223.223;adorn=only"}
gtaagtaatggatagcattcaagtt..........tcttttatttcatatcattgcttag
14 ORUFI06G28670.1.exon14 26,635,243 26,634,851 0 0 393
{"url":"/Oryza_rufipogon/Component/Transcript/Exons/exons?g=ORUFI06G28670;r=60X0P+026633904-26646338;t=ORUFI06G28670.1;db=core;time=1755248007223.223;adorn=only","provisional":{"ref":{"style":[[0,""],[0,"color:#1044ee"]]},"legend":{"exons/Introns":{"intron":{"label":"#aaaaaa","class":"ei","text":"Intron sequence","default":null},"flanking":{"class":"ef","default":null,"text":"Flanking sequence","label":"#008000"},"exon1":{"class":"e1","default":null,"text":"Translated sequence","label":"#1044ee"}},"_messages":[]},"expect":[],"flourishes":{},"seq":[{"style":[1]},-5,{"style":[1,-32,0]}]}}
GTTGAAATTGTTGGGGTCTCTGAAGATACCAAGGACAGAGATATTATCTTAGAAAATGAG ATCTTTGACACCAGACAGGCATTCCTGAGTTTTTGTCAAGGGTATCATTATCAATATGAC ACCCTCCGCCGTGCAAAGCATTCCACCATGATGATGCTATACCACCTTCATAATCCAACT GGACCAGCTTTTGTTGCCACATGTAATGTCTGCAATTGCGATATTGAAAATGGTCAAGTG TGGTATTGTAAAGATTGCCCAGACTTTGATATGTGTGCTTCATGTTACCAAAAACATGGA GGTGCCAATCATCATCACAAGTTAACAAACCATCCATCATGTGCAGAATGTAATGTTCAA AACAAGGGAGCTTGGCAGAAGCACGTTCAGCAG
Intron 14-15 26,634,850 26,634,345 506
{"url":"/Oryza_rufipogon/Component/Transcript/Exons/exons?g=ORUFI06G28670;r=60X0P+026633904-26646338;t=ORUFI06G28670.1;db=core;time=1755248007223.223;adorn=only","provisional":{"ref":{"style":[[0,""],[0,"color:#aaaaaa"]]},"legend":{"exons/Introns":{"intron":{"default":null,"text":"Intron sequence","class":"ei","label":"#aaaaaa"},"flanking":{"class":"ef","text":"Flanking sequence","default":null,"label":"#008000"},"exon1":{"label":"#1044ee","class":"e1","text":"Translated sequence","default":null}},"_messages":[]},"expect":[],"flourishes":{},"seq":[{"style":[1]}]}}
gtgatttctattttctgagcaaatt..........ttatgttcttttcttggtcctgcag
15 ORUFI06G28670.1.exon15 26,634,344 26,634,127 0 2 218
{"provisional":{"ref":{"style":[[0,""],[0,"color:#1044ee"]]},"legend":{"exons/Introns":{"intron":{"label":"#aaaaaa","class":"ei","text":"Intron sequence","default":null},"flanking":{"default":null,"text":"Flanking sequence","class":"ef","label":"#008000"},"exon1":{"class":"e1","text":"Translated sequence","default":null,"label":"#1044ee"}},"_messages":[]},"flourishes":{},"expect":[],"seq":[{"style":[1]},-2,{"style":[1,-37,0]}]},"url":"/Oryza_rufipogon/Component/Transcript/Exons/exons?g=ORUFI06G28670;r=60X0P+026633904-26646338;t=ORUFI06G28670.1;db=core;time=1755248007223.223;adorn=only"}
GTGCGTGTATGGCTTGAACTTGCACTGCATGCATCATCATGTCATGTTCGTAATTGCCAA TACCCTAACTGCCGAAAACTTAAGGGACTCTTTCATCATGGGGCGCAGTGCAAGATACGA CTAACTAAAGGTTGTAAACAATGTGCGAGAATGTGGTATATAATTCGACTCCACTCCCAA TCTTGCAGACAATCAGATTGTGCTGTGCCAAGATGCCG
Intron 15-16 26,634,126 26,634,018 109
{"provisional":{"flourishes":{},"expect":[],"legend":{"exons/Introns":{"intron":{"class":"ei","default":null,"text":"Intron sequence","label":"#aaaaaa"},"flanking":{"label":"#008000","default":null,"text":"Flanking sequence","class":"ef"},"exon1":{"label":"#1044ee","class":"e1","default":null,"text":"Translated sequence"}},"_messages":[]},"seq":[{"style":[1]}],"ref":{"style":[[0,""],[0,"color:#aaaaaa"]]}},"url":"/Oryza_rufipogon/Component/Transcript/Exons/exons?g=ORUFI06G28670;r=60X0P+026633904-26646338;t=ORUFI06G28670.1;db=core;time=1755248007223.223;adorn=only"}
gtaggccttcccctccaaccccttc..........gtaattttgcgttgcttgggcacag
16 ORUFI06G28670.1.exon16 26,634,017 26,633,904 2 - 114
{"provisional":{"ref":{"style":[[0,""],[0,"color:#1044ee"],[7,"cd6839"]]},"expect":[],"flourishes":{},"legend":{"exons/Introns":{"exon1":{"label":"#1044ee","class":"e1","text":"Translated sequence","default":null},"intron":{"text":"Intron sequence","default":null,"class":"ei","label":"#aaaaaa"},"flanking":{"class":"ef","default":null,"text":"Flanking sequence","label":"#008000"},"utr":{"class":"eu","text":"UTR","default":null,"label":"#cd6839"}},"_messages":[]},"seq":[{"style":[1]},{"style":[1,-51,2,-1,0]}]},"url":"/Oryza_rufipogon/Component/Transcript/Exons/exons?g=ORUFI06G28670;r=60X0P+026633904-26646338;t=ORUFI06G28670.1;db=core;time=1755248007223.223;adorn=only"}
GGATTTTAAAAGTTTCGAAAGGAAACAGAACCAGCTGTCCGAGTCTAGGAGGATGGCTTC TGTAAATGAGAGGGTAAGGCAAAGAGTTGCAGAAGTAACTCGCCATGAATGAAG
3' downstream sequence
{"url":"/Oryza_rufipogon/Component/Transcript/Exons/exons?g=ORUFI06G28670;r=60X0P+026633904-26646338;t=ORUFI06G28670.1;db=core;time=1755248007223.223;adorn=only","provisional":{"ref":{"style":[[0,""],[0,"color:#008000"]]},"expect":[],"legend":{"exons/Introns":{"exon1":{"label":"#1044ee","default":null,"text":"Translated sequence","class":"e1"},"intron":{"label":"#aaaaaa","class":"ei","default":null,"text":"Intron sequence"},"flanking":{"default":null,"text":"Flanking sequence","class":"ef","label":"#008000"},"utr":{"class":"eu","default":null,"text":"UTR","label":"#cd6839"}},"_messages":[]},"flourishes":{},"seq":[{"style":[1]}]}}
gaataaaattacacaagcagagaatcactaacaccaaagtgctttgtcat..........
![[RSS logo]](/i/rss_icon_16.png "Ensembl blog"){kind=icon}
![[twitter logo]](/i/twitter.png "Follow us on Twitter!")
