Transcript: ORUFI05G19220.1

Name	Transcript ID	bp	Protein	Biotype	UniProt	Flags
-	ORUFI05G19220.1	2802	933aa	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A0E0PN30	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical,
-	ORUFI05G19220.2	2445	814aa	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A0E0PN31	-

Exons/ Introns

Translated sequence
Flanking sequence
Intron sequence

Markup

loadingloaded

▼▲


..........gtggaggacgaagccgtgtagctgccgccgtcgtcttaaattttgggacg
ATGGACAAAAGAGTTATAACCAATCTCATGGAGGAGAGGCGGTGGGTAGAAGTCACCAAC
AATGGTAGACGCACGACGGAAAATG                                   
gtgcctcaatgaattcttgggcagc..........tgacatgcgtcactagtctatgcag
TGTTCACGGGAAGCGTCGTGCGGCACTGCCCGCGGAGATTATTTTCCCTCCTTACTTTGG
CTCTCGCATGCGTGGAGGAAGGAAG                                   
gtttaggcagaggctaataagtgggcgggtaagctgtaagcag                 
ATCAAGATCTTTATCAGCTGCGCCGTACAACGCGTGCCTCTGCTCGACCAGGTACCGTGT
AGCATCACGGTTACG                                             
gtaagttgtcgtgatcctttttttt..........agcccactaaagaaaaggactgaag
GAGAAAAACTAGATCGACAGACTTCCACCAACGCGAAGCGGCACCAAGAAAGACCGTCCG
CCGGCATCCGTCGCCCACCGATCATCCGATGGCGTCCTCCTCGGTGGCGGCGACGGCGGC
GGAGCCGGGGCCGCACGCGGCGGGAGAGAAGGTGGCGGCGGCCGCGGTGTTCTGGCACGA
GGGCATGCTGGCCCACGACGCCGGCCGCGGCGTGTTCGGCAGGGGCCTCGACCCGGGCTT
CCTCGACGTGCTCGACCATCACCCGGAGAACGCCGACCGCGTCCGCAACATGGTCTCCAT
CCTCCGCCGCGGCCCCATCGCGCGCTTCCTCTCCTGGCACTCCGGCCGCCCCGCCCACGC
CGCCGAGCTCCTCTCCTTCCACTCTGCCG                               
gtcagcccccaattataatcttgta..........ctatgaatcttgtcgtggttggcag
AATACATAGAGGAGCTCGTGCAAGCAGATTCTGCTGGTGCCAACAACAAGAAGATATGTG
AATGCACTTTCTTGAACCCTGGTTCCTGGGATGCTGCGCTTCTGGCGGCTGGAACAACCT
TATCAGCGATGAAGCACATACTAGACGGGCATGCCAAGATTGCCTACGCCCTGGTCCGAC
CCCCTGGCCATCATGCGCAACCCGACCGTGCCGATGGCTACTGCTTTCTGAACAATGCCG
GGCTTGCAGTGAAGCTGGCTCTGGATTCAGGGCGCAGAAGGGTCGCCGTTGTTGATATCG
ATGTGCACTATGGGAATGGCACTGCAGAGGGGTTCTACCACACAGACAGCGTGCTGACGA
TCTCTCTTCACATGAAGCATGGTTCATGGGGTCCATCGCATCCCCAGAGCGGCTTGGTTG
ATGAGACTGGTGAAGGCAGGGGTCTTGGGTACAATCTCAATATCCCTCTGCCTAATGGCA
GTGGGGATGCAGGGTATGAATATGCGATGAATGAATTAGTC                   
gttccggccattgagaagtttcgcc..........gttaattgttattatgcccatgcag
TTTGATCCTAATGGAAGACAGTGCTTAACCATGGATGGTTATAGGAAAATTGGACAAATA
ATGAGGGGCATGGCTGATCAACACAGCAATGGTCAAATACTGATTGTCCAGGAAGGAGGT
TATCACATCACCTATTCGGCATATTGTCTGCATGCAACGCTGGAAGGTGTTTTGAATCTG
CAGGCCCCATTGCTTGATGACCCATTGGGTTTTTATCCAGATGATGAAAAATACACCATG
CAAGCCGTGGACATCATCAAGAAATGCTGGAAAGAATCTATTCC                
gttcttgaaggatatatagaaatcc..........cccactttactaggttctccatcag
ACAACGAGGCCCACCAGAATTTCGATCTTATACAGCCCACGCATATCTTGTTAATTTCCA
GCGCTGCGAGCCTGCACGAACTCACGGAGCCCCGGAGGAAGAAGACTCTCGGTCAAGAGT
CAAGACTTCGACCAATCGACCAACACGAAGCGGCAAAGGAAACGTCACCGTCGCGGCGTC
GCCGATGGAGTCGTCCGCCTCCTCCTCGGCCGCGGTGGCGGCGGAGGGGGCGCCGGCGAC
GGGGGAGCAGCTGGCGGTGTTCTGGCACGAGGGCATGGTGGCCCACGACGCCGGCCGCGG
CGTGTTCGACTCGGGCCACGACCCGGGCTTCCTCGACGTGCTCGACCAGCACCCGGAGAA
CGCCGACCGCGTCCGCAACATGGTCTCCATCCTCCGCCGCGGCCCCATCGCGCGCTTCAT
CTCCTGGCACTCCGGCCGCCCCGCCCACGCCGCCGAGCTCCTCTCCTTCCACTCCGCCG 
gttagccccaaatctcgctatctca..........gtataaatcttgttatggttgacag
AATACATAGAGGAGCTCGTGCAAGCAAATGCCGTTGGTGCCAAGAAGCTGTGTGAAGGCA
CTTTCTTGAACCCTGGATCCTGGGGTGCTGCGCTTCTGGCGGCTGGAACAACTTTATCAG
CGATGAAGCACATACTAGATGGACATGCCAAGATTGCCTATGCGTTGGTCCGCCCCCCTG
GCCATCATGCGCAACCGGACCGTGCTGATGGTTACTGCTTCCTGAACAATGCTGGGCTTG
CAGTGAAGCTGGCTCTGGATTCAGGACGCAGAAAGGTTGCTGTTGTTGATATTGACGTGC
ACTATGGAAATGGCACTGCAGAGGGCTTCTACCACACAGACAGCGTGCTGACGATCTCTC
TTCACATGAAGCATGGTTCATGGGGTCCATCACATCCCCAGAGTGGCTCGGTGGATGAGA
TTGGTGAAGGCAGGGGTCTTGGGTACAATCTCAATATTCCTTTGCCTAATGGTAGTGGGG
ATGCAGGGTATGAGTATGCGATGAATGAATTAGTTGTTCCAGCCATAGAGAAGTTTCGTC
CTGAGCTTTTGGTTTTTGTTGTTGGCCAAGATTCTAGTACA                   
gtgagtcgaactggcatctatctta..........attaatggttgttattcccatgcag
TTTGATCCCAATGGAAGACAGTGCTTAACCATGGATGGTTATCGGAAAATTGGGCAAATA
ATGAGAGGCATGGCTGATCAACACAGCAATGGTCAAATATTGATCGTGCAGGAAGGGGGT
TATCACATCAGCTATTCGGCATATTGTCTTCATGCAACACTAGAAGGTGTTCTGAATCTA
CAAGCCCCGTTGCTTGATGATCCAATCGCCTATTATCCAGAGGATGAGAAATACACCATG
AAAGTTGTGGACATCATGAAGAAATGCTGGAAAGAATCTATTCCATTCTTGAAGGACATA
TAG                                                         
aaatccatttcttttagatgcgagtgcccttgaacctcaatttcatatca..........

No.	Exon / Intron	Start	End	Start Phase	End Phase	Length	Sequence
	5' upstream sequence						..........gtggaggacgaagccgtgtagctgccgccgtcgtcttaaattttgggacg
1	ORUFI05G19220.1.exon1	18,780,922	18,780,838	0	1	85	ATGGACAAAAGAGTTATAACCAATCTCATGGAGGAGAGGCGGTGGGTAGAAGTCACCAAC AATGGTAGACGCACGACGGAAAATG
	Intron 1-2	18,780,837	18,780,712			126	gtgcctcaatgaattcttgggcagc..........tgacatgcgtcactagtctatgcag
2	ORUFI05G19220.1.exon2	18,780,711	18,780,627	1	2	85	TGTTCACGGGAAGCGTCGTGCGGCACTGCCCGCGGAGATTATTTTCCCTCCTTACTTTGG CTCTCGCATGCGTGGAGGAAGGAAG
	Intron 2-3	18,780,626	18,780,584			43	gtttaggcagaggctaataagtgggcgggtaagctgtaagcag
3	ORUFI05G19220.1.exon3	18,780,583	18,780,509	2	2	75	ATCAAGATCTTTATCAGCTGCGCCGTACAACGCGTGCCTCTGCTCGACCAGGTACCGTGT AGCATCACGGTTACG
	Intron 3-4	18,780,508	18,780,120			389	gtaagttgtcgtgatcctttttttt..........agcccactaaagaaaaggactgaag
4	ORUFI05G19220.1.exon4	18,780,119	18,779,731	2	1	389	GAGAAAAACTAGATCGACAGACTTCCACCAACGCGAAGCGGCACCAAGAAAGACCGTCCG CCGGCATCCGTCGCCCACCGATCATCCGATGGCGTCCTCCTCGGTGGCGGCGACGGCGGC GGAGCCGGGGCCGCACGCGGCGGGAGAGAAGGTGGCGGCGGCCGCGGTGTTCTGGCACGA GGGCATGCTGGCCCACGACGCCGGCCGCGGCGTGTTCGGCAGGGGCCTCGACCCGGGCTT CCTCGACGTGCTCGACCATCACCCGGAGAACGCCGACCGCGTCCGCAACATGGTCTCCAT CCTCCGCCGCGGCCCCATCGCGCGCTTCCTCTCCTGGCACTCCGGCCGCCCCGCCCACGC CGCCGAGCTCCTCTCCTTCCACTCTGCCG
	Intron 4-5	18,779,730	18,778,203			1,528	gtcagcccccaattataatcttgta..........ctatgaatcttgtcgtggttggcag
5	ORUFI05G19220.1.exon5	18,778,202	18,777,682	1	0	521	AATACATAGAGGAGCTCGTGCAAGCAGATTCTGCTGGTGCCAACAACAAGAAGATATGTG AATGCACTTTCTTGAACCCTGGTTCCTGGGATGCTGCGCTTCTGGCGGCTGGAACAACCT TATCAGCGATGAAGCACATACTAGACGGGCATGCCAAGATTGCCTACGCCCTGGTCCGAC CCCCTGGCCATCATGCGCAACCCGACCGTGCCGATGGCTACTGCTTTCTGAACAATGCCG GGCTTGCAGTGAAGCTGGCTCTGGATTCAGGGCGCAGAAGGGTCGCCGTTGTTGATATCG ATGTGCACTATGGGAATGGCACTGCAGAGGGGTTCTACCACACAGACAGCGTGCTGACGA TCTCTCTTCACATGAAGCATGGTTCATGGGGTCCATCGCATCCCCAGAGCGGCTTGGTTG ATGAGACTGGTGAAGGCAGGGGTCTTGGGTACAATCTCAATATCCCTCTGCCTAATGGCA GTGGGGATGCAGGGTATGAATATGCGATGAATGAATTAGTC
	Intron 5-6	18,777,681	18,777,048			634	gttccggccattgagaagtttcgcc..........gttaattgttattatgcccatgcag
6	ORUFI05G19220.1.exon6	18,777,047	18,776,764	0	2	284	TTTGATCCTAATGGAAGACAGTGCTTAACCATGGATGGTTATAGGAAAATTGGACAAATA ATGAGGGGCATGGCTGATCAACACAGCAATGGTCAAATACTGATTGTCCAGGAAGGAGGT TATCACATCACCTATTCGGCATATTGTCTGCATGCAACGCTGGAAGGTGTTTTGAATCTG CAGGCCCCATTGCTTGATGACCCATTGGGTTTTTATCCAGATGATGAAAAATACACCATG CAAGCCGTGGACATCATCAAGAAATGCTGGAAAGAATCTATTCC
	Intron 6-7	18,776,763	18,773,696			3,068	gttcttgaaggatatatagaaatcc..........cccactttactaggttctccatcag
7	ORUFI05G19220.1.exon7	18,773,695	18,773,217	2	1	479	ACAACGAGGCCCACCAGAATTTCGATCTTATACAGCCCACGCATATCTTGTTAATTTCCA GCGCTGCGAGCCTGCACGAACTCACGGAGCCCCGGAGGAAGAAGACTCTCGGTCAAGAGT CAAGACTTCGACCAATCGACCAACACGAAGCGGCAAAGGAAACGTCACCGTCGCGGCGTC GCCGATGGAGTCGTCCGCCTCCTCCTCGGCCGCGGTGGCGGCGGAGGGGGCGCCGGCGAC GGGGGAGCAGCTGGCGGTGTTCTGGCACGAGGGCATGGTGGCCCACGACGCCGGCCGCGG CGTGTTCGACTCGGGCCACGACCCGGGCTTCCTCGACGTGCTCGACCAGCACCCGGAGAA CGCCGACCGCGTCCGCAACATGGTCTCCATCCTCCGCCGCGGCCCCATCGCGCGCTTCAT CTCCTGGCACTCCGGCCGCCCCGCCCACGCCGCCGAGCTCCTCTCCTTCCACTCCGCCG
	Intron 7-8	18,773,216	18,773,032			185	gttagccccaaatctcgctatctca..........gtataaatcttgttatggttgacag
8	ORUFI05G19220.1.exon8	18,773,031	18,772,451	1	0	581	AATACATAGAGGAGCTCGTGCAAGCAAATGCCGTTGGTGCCAAGAAGCTGTGTGAAGGCA CTTTCTTGAACCCTGGATCCTGGGGTGCTGCGCTTCTGGCGGCTGGAACAACTTTATCAG CGATGAAGCACATACTAGATGGACATGCCAAGATTGCCTATGCGTTGGTCCGCCCCCCTG GCCATCATGCGCAACCGGACCGTGCTGATGGTTACTGCTTCCTGAACAATGCTGGGCTTG CAGTGAAGCTGGCTCTGGATTCAGGACGCAGAAAGGTTGCTGTTGTTGATATTGACGTGC ACTATGGAAATGGCACTGCAGAGGGCTTCTACCACACAGACAGCGTGCTGACGATCTCTC TTCACATGAAGCATGGTTCATGGGGTCCATCACATCCCCAGAGTGGCTCGGTGGATGAGA TTGGTGAAGGCAGGGGTCTTGGGTACAATCTCAATATTCCTTTGCCTAATGGTAGTGGGG ATGCAGGGTATGAGTATGCGATGAATGAATTAGTTGTTCCAGCCATAGAGAAGTTTCGTC CTGAGCTTTTGGTTTTTGTTGTTGGCCAAGATTCTAGTACA
	Intron 8-9	18,772,450	18,771,853			598	gtgagtcgaactggcatctatctta..........attaatggttgttattcccatgcag
9	ORUFI05G19220.1.exon9	18,771,852	18,771,550	0	0	303	TTTGATCCCAATGGAAGACAGTGCTTAACCATGGATGGTTATCGGAAAATTGGGCAAATA ATGAGAGGCATGGCTGATCAACACAGCAATGGTCAAATATTGATCGTGCAGGAAGGGGGT TATCACATCAGCTATTCGGCATATTGTCTTCATGCAACACTAGAAGGTGTTCTGAATCTA CAAGCCCCGTTGCTTGATGATCCAATCGCCTATTATCCAGAGGATGAGAAATACACCATG AAAGTTGTGGACATCATGAAGAAATGCTGGAAAGAATCTATTCCATTCTTGAAGGACATA TAG
	3' downstream sequence						aaatccatttcttttagatgcgagtgcccttgaacctcaatttcatatca..........

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Transcript: ORUFI05G19220.1

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