Summary
Sequence
Protein Information
- Protein summary
- Domains & features
- Variants
- PDB 3D protein model
- AlphaFold predicted model
Genetic Variation
- Variant table
- Variant image
- Population comparison
- Comparison image
External References
- General identifiers
- Oligo probes
Supporting evidence
ID History
- Transcript history
- Protein history

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Ensembl Plants is produced in collaboration with Gramene

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Transcript: ORUFI04G19620.1

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Location

Chromosome 4: 21,256,221-21,258,514 forward strand.

About this transcript

This transcript has 4 exons, is annotated with 17 domains and features and maps to 43 oligo probes.

Gene

This transcript is a product of gene ORUFI04G19620 Show transcript tableHide transcript table

Name	Transcript ID	bp	Protein	Biotype	UniProt	Flags
-	ORUFI04G19620.1	1593	421aa	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A0E0PBD1	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical,

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Exons

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Download sequence

Exons/ Introns

Translated sequence
Flanking sequence
Intron sequence
UTR

Markup

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No.	Exon / Intron	Start	End	Start Phase	End Phase	Length	Sequence
	5' upstream sequence						..........acaataattcaaccttttccatcaaccaattgcagaacaagagtatatgc
1	ORUFI04G19620.1.exon1	21,256,221	21,256,352	0	0	132	ATGCTGCCACTAGTGGCGTACCTGGACCAAGACACGCAGATGCGCTTCCATGTCCGGTGC TGTCCGAGGCTGAGCACGTCGTTCAGCTACAAGGAACACGGCACTGCGCCCGTCGTCAGT ACGATGCTGCTG
	Intron 1-2	21,256,353	21,256,371			19	gtagtatacatatctccag
2	ORUFI04G19620.1.exon2	21,256,372	21,256,412	0	2	41	TGGAATTCAAAATTTTGCGAGAAGGGGAGGAGGAGTGGAAG
	Intron 2-3	21,256,413	21,256,452			40	gtaacggacatggtcgtagacgggggcgatgcggctgaag
3	ORUFI04G19620.1.exon3	21,256,453	21,256,829	2	1	377	AGGGCCTGCCGCTCGTCGGCCGCGGAGGACGAGCCGCAGCTCACGGCGGCGAACCCGCGG CGGCGGCGGCGGCGGCGAGCGGCGGGGGCGGGCGCCGCGGGGCCCGCCGAAATCNTTCCG CCACGTCCTCGCCGCCGCCACCTACACGCTGCACGAGCAGGGCGGGGAGCGGCAGGACCG CGCGGGCAGCGTGTCGCTCTTCGCCGTCGACGCCGGCGAGGAGGACGCGCCCCGGAGGCT CCGGCTGCTCCACACGGTGGAGACCGCCGGGGTGTTCGACATGAAGTGGAGCCCCGTGGC GCCTCTGCTCGCGCAGGCCGACGCCCACGGCCGCCTCGCGCTCTGGCGCCTGGAGCAGGA GGACGGATCGGACAAAG
	Intron 3-4	21,256,830	21,257,471			642	gtgctgtttgttcctgcatttgcat..........tgctttatgtgaccgaattatgcag
4	ORUFI04G19620.1.exon4	21,257,472	21,258,514	1	-	1,043	GTGCTGTTCTCAGGGATGTCTGTTCTGGAGACATTTCTTCTTCGATGTGCTTGTTTGTGG ACTGGAACCAAACTGCCGAGGCACTTTCCGTTGGATTATCGGATGGTTCCCTGTCTGTGG TTTCCATGAGGGAGGACCGCTTGGAGGTATCAGAACAGTGGACTGCTCATCAGTATGAAG TGTGGACTTGCTATTTTGATCGTGCAAATCCACACTTGTTATACAGCGGATCAGACGACT GCTCCTTCAGCTGCTGGGACTTGCGACAGAACCCATCAAACGCTGTGTTTCAGAACAAAA AGTCGCATAATATGGGTGTCTGTTGCATTGCTCAGAATCCACTAGAGGGGAACATGCTAC TTACTGGAAGCTATGATGAATTTCTCAGAGTTTGGGACATAAGATCAATGGTGAAACCCG TTAATGTGAAGTCCCTAAATTTAGGGGGTGGTGTATGGAGGATTAAATATCATCCTCTTA TTGCAGATGTCGTCTTGGCTGCATGCATGCACAATGGGTTTGCCATTGTTAAAGTAGGTA CTGGGGATGCTGCAGTAGTGGAAACATATTGCAAGCATGAGTCCTTAGCATATGGTGCGG ATTGGCAGATAAGTGAAGGTGCAGAACAGAACAAGAATTTTTCAGTTGTTGCTACCTGTT CATTTTATGATCGACTCCTCCGTGTGTGGCAACCGGAGAACCTAGGCAATCTTTAAGAGT GAAAGTGCCATTGCACTCAGTTCAAGTATCACTATGTGGACTTGTTTCCAGGTAGCTCCT CAAAGTTGTGCTGATTTATTTAAAGACATGAGCTTTTGGTAGAATCATGTCTGTTCCATA GCTTGTCATTCACATATATTTGTGTGATGCCAGCTTTCCCGTCGCAAAACTATATATTTG TATGGTCCTCAAAGATGTTTCCTGTTGATTATATTTGAAGTACTCCATTTTGTAGATTAT ATTGACGCTTTAACAACAATCTTTACATCACAAAATTGCCTTAGTGTGGATCTTCCTTAG CTTTTTGAATTTTGACCGATCAC
	3' downstream sequence						acttctgtctgtaaattactgtattatgtaagcttgtttgataatttgaa..........

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