Summary
Sequence
Protein Information
- Protein summary
- Domains & features
- Variants
- PDB 3D protein model
- AlphaFold predicted model
Genetic Variation
- Variant table
- Variant image
- Population comparison
- Comparison image
External References
- General identifiers
- Oligo probes
Supporting evidence
ID History
- Transcript history
- Protein history

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Ensembl Plants is produced in collaboration with Gramene

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Transcript: ORUFI12G02190.1

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Location

Chromosome 12: 1,516,026-1,519,582 reverse strand.

About this transcript

This transcript has 11 exons, is annotated with 20 domains and features and maps to 19 oligo probes.

Gene

This transcript is a product of gene ORUFI12G02190 Show transcript tableHide transcript table

Name	Transcript ID	bp	Protein	Biotype	UniProt	Flags
-	ORUFI12G02190.1	1229	372aa	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A0E0RDC3	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical,

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Domains & features

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Domains

Original project that identified the domainDomain source	Start	End	Description	Accession	InterPro
PANTHER	12	372	Glutamate-rich WD repeat-containing	PTHR45903	IPR051972 [Display all genes with this domain]
Pfam	43	109	Histone-binding protein RBBP4, N-terminal	PF12265	IPR022052 [Display all genes with this domain]
SMART	144	186	WD40 repeat	SM00320	IPR001680 [Display all genes with this domain]
SMART	210	250	WD40 repeat	SM00320	IPR001680 [Display all genes with this domain]
SMART	251	285	WD40 repeat	SM00320	IPR001680 [Display all genes with this domain]
PROSITE profiles	264	290	WD40 repeat	PS50082	IPR001680 [Display all genes with this domain]
Pfam	270	285	WD40 repeat	PF00400	IPR001680 [Display all genes with this domain]
SMART	289	329	WD40 repeat	SM00320	IPR001680 [Display all genes with this domain]
SMART	335	370	WD40 repeat	SM00320	IPR001680 [Display all genes with this domain]
Pfam	338	370	WD40 repeat	PF00400	IPR001680 [Display all genes with this domain]
Superfamily	154	371	WD40-repeat-containing domain superfamily	SSF50978	IPR036322 [Display all genes with this domain]
Gene3D	4	372	WD40/YVTN repeat-like-containing domain superfamily	2.130.10.10	IPR015943 [Display all genes with this domain]

Other features

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Feature type
Start
End

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Filter

Feature type	Start	End
MobiDBLite	1	14
MobiDBLite	1	26
MobiDBLite	117	144
MobiDBLite	124	142
Seg	4	22
Seg	123	144
SignalP GRAM POSITIVE	1	19
Alphafold	1	372

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Personal Data