Summary
Sequence
Protein Information
- Protein summary
- Domains & features
- Variants
- PDB 3D protein model
- AlphaFold predicted model
Genetic Variation
- Variant table
- Variant image
- Population comparison
- Comparison image
External References
- General identifiers
- Oligo probes
Supporting evidence
ID History
- Transcript history
- Protein history

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Ensembl Plants is produced in collaboration with Gramene

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Transcript: ORUFI11G12510.2

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Location

Chromosome 11: 13,397,205-13,406,847 reverse strand.

About this transcript

This transcript has 15 exons, is annotated with 20 domains and features and maps to 15 oligo probes.

Gene

This transcript is a product of gene ORUFI11G12510 Show transcript tableHide transcript table

Name	Transcript ID	bp	Protein	Biotype	UniProt	Flags
-	ORUFI11G12510.1	1517	504aa	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A0E0R7S7	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical,
-	ORUFI11G12510.2	1436	477aa	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A0E0R7S8	-
-	ORUFI11G12510.3	1091	362aa	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A0E0R7S9	-
-	ORUFI11G12510.4	1004	333aa	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A0E0R7T0	-

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Domains & features

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Domains

Original project that identified the domainDomain source	Start	End	Description	Accession	InterPro
PANTHER	27	433	-	PTHR23327	-
Superfamily	188	256	-	SSF57850	-
CDD	191	235	-	cd16514	-
Pfam	193	231	-	PF13923	-
SMART	277	469	Lon protease, N-terminal domain	SM00464	IPR003111 [Display all genes with this domain]
Gene3D	276	356	Lon protease, N-terminal domain superfamily	2.30.130.40	IPR046336 [Display all genes with this domain]
Superfamily	278	432	PUA-like superfamily	SSF88697	IPR015947 [Display all genes with this domain]
PROSITE profiles	37	70	Tetratricopeptide repeat	PS50005	IPR019734 [Display all genes with this domain]
SMART	37	70	Tetratricopeptide repeat	SM00028	IPR019734 [Display all genes with this domain]
SMART	128	161	Tetratricopeptide repeat	SM00028	IPR019734 [Display all genes with this domain]
Gene3D	32	182	Tetratricopeptide-like helical domain superfamily	1.25.40.10	IPR011990 [Display all genes with this domain]
Superfamily	39	173	Tetratricopeptide-like helical domain superfamily	SSF48452	IPR011990 [Display all genes with this domain]
SMART	194	231	Zinc finger, RING-type	SM00184	IPR001841 [Display all genes with this domain]
PROSITE profiles	194	232	Zinc finger, RING-type	PS50089	IPR001841 [Display all genes with this domain]
PROSITE patterns	209	218	Zinc finger, RING-type, conserved site	PS00518	IPR017907 [Display all genes with this domain]
Gene3D	183	275	Zinc finger, RING/FYVE/PHD-type	3.30.40.10	IPR013083 [Display all genes with this domain]

Other features

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Feature type	Start	End
Seg	378	391
Seg	417	430
Seg	453	467
Alphafold	1	477

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