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    Oryza rufipogon (OR_W1943) ▼

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    Transcript: ORUFI10G15250.1

    Location

    Chromosome 10: 16,582,248-16,589,098 reverse strand.

    About this transcript

    This transcript has 18 exons, is annotated with 39 domains and features and maps to 75 oligo probes.

    Gene

    This transcript is a product of gene ORUFI10G15250 Show transcript tableHide transcript table

    Show/hide columns (1 hidden)
    • Name
    • Transcript ID
    • bp
    • Protein
    • Translation ID
    • Biotype
    • UniProt
    • Flags
    Download what you seeDownload whole table
    NameTranscript IDbpProteinBiotypeUniProtFlags
    -ORUFI10G15250.12628875aa
     
    Protein coding
    		A0A0E0R0U3 Ensembl Canonical
    -ORUFI10G15250.22657822aa
     
    Protein coding
    		A0A0E0R0U4 -

    Domains & features

    Domains

    Show/hide columns
    • Domain source
    • Start
    • End
    • Description
    • Accession
    • InterPro
    Download what you seeDownload whole table
    Domain sourceStartEndDescriptionAccessionInterPro
    PANTHER4868-PTHR19845-
    CDD8213-cd00200-
    PROSITE profiles1244-PS50294-
    PROSITE profiles5589-PS50294-
    PROSITE profiles97131-PS50294-
    PROSITE profiles139176-PS50294-
    PROSITE profiles181216-PS50294-
    Prints116130G-protein beta WD-40 repeatPR00320IPR020472 [Display all genes with this domain]
    Prints158172G-protein beta WD-40 repeatPR00320IPR020472 [Display all genes with this domain]
    Prints200214G-protein beta WD-40 repeatPR00320IPR020472 [Display all genes with this domain]
    HAMAP1869Katanin p80 WD40 repeat-containing subunit B1MF_03022IPR026962 [Display all genes with this domain]
    Pfam708865Katanin p80 subunit, C-terminalPF13925IPR028021 [Display all genes with this domain]
    SMART545WD40 repeatSM00320IPR001680 [Display all genes with this domain]
    Pfam944WD40 repeatPF00400IPR001680 [Display all genes with this domain]
    PROSITE profiles1254WD40 repeatPS50082IPR001680 [Display all genes with this domain]
    SMART4887WD40 repeatSM00320IPR001680 [Display all genes with this domain]
    Pfam5287WD40 repeatPF00400IPR001680 [Display all genes with this domain]
    PROSITE profiles5596WD40 repeatPS50082IPR001680 [Display all genes with this domain]
    SMART90129WD40 repeatSM00320IPR001680 [Display all genes with this domain]
    Pfam92129WD40 repeatPF00400IPR001680 [Display all genes with this domain]
    PROSITE profiles97138WD40 repeatPS50082IPR001680 [Display all genes with this domain]
    SMART132171WD40 repeatSM00320IPR001680 [Display all genes with this domain]
    Pfam135171WD40 repeatPF00400IPR001680 [Display all genes with this domain]
    PROSITE profiles139180WD40 repeatPS50082IPR001680 [Display all genes with this domain]
    SMART174213WD40 repeatSM00320IPR001680 [Display all genes with this domain]
    Pfam175213WD40 repeatPF00400IPR001680 [Display all genes with this domain]
    PROSITE profiles181222WD40 repeatPS50082IPR001680 [Display all genes with this domain]
    SMART224262WD40 repeatSM00320IPR001680 [Display all genes with this domain]
    PROSITE patterns158172WD40 repeat, conserved sitePS00678IPR019775 [Display all genes with this domain]
    PROSITE patterns200214WD40 repeat, conserved sitePS00678IPR019775 [Display all genes with this domain]
    Superfamily7302WD40-repeat-containing domain superfamilySSF50978IPR036322 [Display all genes with this domain]
    Gene3D2140WD40/YVTN repeat-like-containing domain superfamily2.130.10.10IPR015943 [Display all genes with this domain]
    Gene3D141305WD40/YVTN repeat-like-containing domain superfamily2.130.10.10IPR015943 [Display all genes with this domain]

    Other features

    Show/hide columns
    • Feature type
    • Start
    • End
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    Feature typeStartEnd
    MobiDBLite650660
    MobiDBLite650671
    Seg334347
    Alphafold1875
    Alphafold1875
    Alphafold1875

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