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    Oryza rufipogon (OR_W1943) ▼

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    Transcript: ORUFI09G10500.1

    Location

    Chromosome 9: 12,217,135-12,221,273 forward strand.

    About this transcript

    This transcript has 11 exons, is annotated with 37 domains and features and maps to 56 oligo probes.

    Gene

    This transcript is a product of gene ORUFI09G10500 Show transcript tableHide transcript table

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    • Name
    • Transcript ID
    • bp
    • Protein
    • Translation ID
    • Biotype
    • UniProt
    • Flags
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    NameTranscript IDbpProteinBiotypeUniProtFlags
    -ORUFI09G10500.11743392aa
     
    Protein coding
    		A0A0E0QR87 Ensembl Canonical

    Domains & features

    Domains

    Show/hide columns
    • Domain source
    • Start
    • End
    • Description
    • Accession
    • InterPro
    Download what you seeDownload whole table
    Domain sourceStartEndDescriptionAccessionInterPro
    CDD174-cd01805-
    Gene3D179-3.10.20.90-
    PANTHER1377-PTHR10621-
    Gene3D151201-1.10.8.10-
    Gene3D336383-1.10.8.10-
    SMART260303Heat shock chaperonin-bindingSM00727IPR006636 [Display all genes with this domain]
    Superfamily144202UBA-like superfamilySSF46934IPR009060 [Display all genes with this domain]
    Superfamily320391UBA-like superfamilySSF46934IPR009060 [Display all genes with this domain]
    NCBIFAM1386UV excision repair protein Rad23TIGR00601IPR004806 [Display all genes with this domain]
    TIGRFAM1386UV excision repair protein Rad23TIGR00601IPR004806 [Display all genes with this domain]
    Prints288310UV excision repair protein Rad23PR01839IPR004806 [Display all genes with this domain]
    Prints338354UV excision repair protein Rad23PR01839IPR004806 [Display all genes with this domain]
    Prints355369UV excision repair protein Rad23PR01839IPR004806 [Display all genes with this domain]
    Prints370385UV excision repair protein Rad23PR01839IPR004806 [Display all genes with this domain]
    PROSITE profiles156199Ubiquitin-associated domainPS50030IPR015940 [Display all genes with this domain]
    SMART158198Ubiquitin-associated domainSM00165IPR015940 [Display all genes with this domain]
    Pfam159196Ubiquitin-associated domainPF00627IPR015940 [Display all genes with this domain]
    PROSITE profiles342382Ubiquitin-associated domainPS50030IPR015940 [Display all genes with this domain]
    Pfam343379Ubiquitin-associated domainPF00627IPR015940 [Display all genes with this domain]
    SMART344381Ubiquitin-associated domainSM00165IPR015940 [Display all genes with this domain]
    SMART175Ubiquitin-like domainSM00213IPR000626 [Display all genes with this domain]
    PROSITE profiles179Ubiquitin-like domainPS50053IPR000626 [Display all genes with this domain]
    Pfam376Ubiquitin-like domainPF00240IPR000626 [Display all genes with this domain]
    Superfamily193Ubiquitin-like domain superfamilySSF54236IPR029071 [Display all genes with this domain]
    Pfam262318XPC-binding domainPF09280IPR015360 [Display all genes with this domain]
    Gene3D251318XPC-binding domain superfamily1.10.10.540IPR036353 [Display all genes with this domain]
    Superfamily259324XPC-binding domain superfamilySSF101238IPR036353 [Display all genes with this domain]

    Other features

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    • Feature type
    • Start
    • End
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    Feature typeStartEnd
    MobiDBLite80109
    MobiDBLite209237
    MobiDBLite214231
    Seg7792
    Seg94140
    Seg214231
    Alphafold1392
    Alphafold1392
    Alphafold1392
    Alphafold1392

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