Oryza rufipogon (OR_W1943)
Location
About this transcript

This transcript has 6 exons, is annotated with 19 domains and features and maps to 81 oligo probes.

Gene
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  • Name
  • Transcript ID
  • bp
  • Protein
  • Translation ID
  • Biotype
  • UniProt
  • Flags
NameTranscript IDbpProteinBiotypeUniProtFlags
-ORUFI08G00420.11692563aa
 
Protein coding
A0A0E0QDC5 Ensembl Canonical

Domains

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  • Domain source
  • Start
  • End
  • Description
  • Accession
  • InterPro
Domain sourceStartEndDescriptionAccessionInterPro
PANTHER44389-PTHR47162-
Gene3D226349-2.30.30.1150-
Superfamily290350Zinc finger, FYVE/PHD-typeSSF57903IPR011011 [Display all genes with this domain]
Superfamily420476Zinc finger, FYVE/PHD-typeSSF57903IPR011011 [Display all genes with this domain]
Superfamily477525Zinc finger, FYVE/PHD-typeSSF57903IPR011011 [Display all genes with this domain]
Pfam299345Zinc finger, PHD-fingerPF00628IPR019787 [Display all genes with this domain]
PROSITE profiles420478Zinc finger, PHD-fingerPS50016IPR019787 [Display all genes with this domain]
PROSITE profiles474524Zinc finger, PHD-fingerPS50016IPR019787 [Display all genes with this domain]
Pfam477521Zinc finger, PHD-fingerPF00628IPR019787 [Display all genes with this domain]
SMART298346Zinc finger, PHD-typeSM00249IPR001965 [Display all genes with this domain]
SMART422476Zinc finger, PHD-typeSM00249IPR001965 [Display all genes with this domain]
SMART477522Zinc finger, PHD-typeSM00249IPR001965 [Display all genes with this domain]
Gene3D414529Zinc finger, RING/FYVE/PHD-type3.30.40.10IPR013083 [Display all genes with this domain]

Other features

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  • Feature type
  • Start
  • End
Feature typeStartEnd
MobiDBLite146
MobiDBLite1333
Seg618
Seg128147
Alphafold1563
Alphafold1563