Oryza rufipogon (OR_W1943)
Location
About this transcript

This transcript has 9 exons, is annotated with 19 domains and features and maps to 69 oligo probes.

Gene
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  • Name
  • Transcript ID
  • bp
  • Protein
  • Translation ID
  • Biotype
  • UniProt
  • Flags
NameTranscript IDbpProteinBiotypeUniProtFlags
-ORUFI07G24020.11353450aa
 
Protein coding
A0A0E0QBJ2 Ensembl Canonical

Domains

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  • Domain source
  • Start
  • End
  • Description
  • Accession
  • InterPro
Domain sourceStartEndDescriptionAccessionInterPro
Gene3D52174-2.30.30.140-
CDD66136-cd18642-
Gene3D175231-3.30.60.60-
Gene3D233445-3.40.630.30-
CDD286344-cd04301-
Superfamily175446Acyl-CoA N-acyltransferaseSSF55729IPR016181 [Display all genes with this domain]
Superfamily55175Chromo-like domain superfamilySSF54160IPR016197 [Display all genes with this domain]
SMART77137Chromo/chromo shadow domainSM00298IPR000953 [Display all genes with this domain]
PROSITE profiles174445Histone acetyltransferase domain, MYST-typePS51726IPR002717 [Display all genes with this domain]
Pfam235412Histone acetyltransferase domain, MYST-typePF01853IPR002717 [Display all genes with this domain]
PANTHER70447MYST family histone acetyltransferasesPTHR10615IPR050603 [Display all genes with this domain]
Pfam176230MYST, zinc finger domainPF17772IPR040706 [Display all genes with this domain]
Pfam63122RNA binding activity-knot of a chromodomainPF11717IPR025995 [Display all genes with this domain]
Gene3D353433Winged helix-like DNA-binding domain superfamily1.10.10.10IPR036388 [Display all genes with this domain]

Other features

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  • Feature type
  • Start
  • End
Feature typeStartEnd
Seg643
Seg5059
Seg120136
Alphafold1450
Alphafold1450