Oryza rufipogon (OR_W1943) ▼ 
Summary
SequenceProtein InformationProtein summaryDomains & featuresVariantsPDB 3D protein modelAlphaFold predicted modelGenetic VariationVariant tableVariant imagePopulation comparisonComparison imageExternal ReferencesSupporting evidenceID HistoryTranscript historyProtein history.
Chromosome 6: 23,030,919-23,037,394 reverse strand.
This transcript has 9 exons, is annotated with 59 domains and features and maps to 56 oligo probes.
This transcript is a product of gene ORUFI06G23920 Show transcript tableHide transcript table
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| Domain source | Start | End | Description | Accession | InterPro |
|---|---|---|---|---|---|
| PANTHER | 29 | 1024 | - | PTHR13145 | - |
| Superfamily | 34 | 89 | - | SSF57850 | - |
| CDD | 38 | 87 | - | cd16702 | - |
| Pfam | 831 | 1008 | - | PF23113 | - |
| PROSITE profiles | 31 | 92 | Zinc finger, RING-CH-type | PS51292 | IPR011016 [Display all genes with this domain] |
| SMART | 38 | 86 | Zinc finger, RING-CH-type | SM00744 | IPR011016 [Display all genes with this domain] |
| Pfam | 39 | 85 | Zinc finger, RING-CH-type | PF12906 | IPR011016 [Display all genes with this domain] |
| PROSITE profiles | 39 | 86 | Zinc finger, RING-type | PS50089 | IPR001841 [Display all genes with this domain] |
| Gene3D | 22 | 97 | Zinc finger, RING/FYVE/PHD-type | 3.30.40.10 | IPR013083 [Display all genes with this domain] |
| Feature type | Start | End |
|---|---|---|
| MobiDBLite | 1 | 37 |
| MobiDBLite | 27 | 36 |
| MobiDBLite | 1022 | 1054 |
| Phobius | 1 | 121 |
| Phobius | 122 | 144 |
| Phobius | 145 | 163 |
| Phobius | 164 | 188 |
| Phobius | 189 | 315 |
| Phobius | 316 | 337 |
| Phobius | 338 | 433 |
| Phobius | 434 | 457 |
| Phobius | 458 | 496 |
| Phobius | 497 | 516 |
| Phobius | 517 | 544 |
| Phobius | 545 | 568 |
| Phobius | 569 | 601 |
| Phobius | 602 | 621 |
| Phobius | 622 | 640 |
| Phobius | 641 | 660 |
| Phobius | 661 | 671 |
| Phobius | 672 | 691 |
| Phobius | 692 | 762 |
| Phobius | 763 | 788 |
| Phobius | 789 | 846 |
| Phobius | 847 | 868 |
| Phobius | 869 | 887 |
| Phobius | 888 | 911 |
| Phobius | 912 | 931 |
| Phobius | 932 | 957 |
| Phobius | 958 | 968 |
| Phobius | 969 | 992 |
| Phobius | 993 | 1073 |
| Seg | 5 | 20 |
| Seg | 28 | 35 |
| Seg | 277 | 286 |
| Seg | 769 | 779 |
| TMHMM | 122 | 144 |
| TMHMM | 168 | 190 |
| TMHMM | 317 | 339 |
| TMHMM | 432 | 454 |
| TMHMM | 497 | 516 |
| TMHMM | 545 | 567 |
| TMHMM | 602 | 624 |
| TMHMM | 771 | 793 |
| TMHMM | 848 | 870 |
| TMHMM | 880 | 902 |
| TMHMM | 933 | 955 |
| TMHMM | 970 | 992 |
| Alphafold | 1 | 1073 |
| Ncoils | 252 | 286 |
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Ensembl Plants release 61 - May 2025 © EMBL-EBI EMBL-EBI
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