Summary
Sequence
Protein Information
- Protein summary
- Domains & features
- Variants
- PDB 3D protein model
- AlphaFold predicted model
Genetic Variation
- Variant table
- Variant image
- Population comparison
- Comparison image
External References
- General identifiers
- Oligo probes
Supporting evidence
ID History
- Transcript history
- Protein history

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Ensembl Plants is produced in collaboration with Gramene

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Transcript: ORUFI06G12480.1

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Location

Chromosome 6: 10,088,117-10,092,662 reverse strand.

About this transcript

This transcript has 8 exons, is annotated with 20 domains and features and maps to 48 oligo probes.

Gene

This transcript is a product of gene ORUFI06G12480 Show transcript tableHide transcript table

Name	Transcript ID	bp	Protein	Biotype	UniProt	Flags
-	ORUFI06G12480.3	1524	496aa	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A0E0PWR3	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical,
-	ORUFI06G12480.2	1521	495aa	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A0E0PWR1	-
-	ORUFI06G12480.4	1491	496aa	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A0E0PWR3	-
-	ORUFI06G12480.1	1488	495aa	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A0E0PWR1	-

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Domains & features

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Domains

Original project that identified the domainDomain source	Start	End	Description	Accession	InterPro
Superfamily	270	336	-	SSF57850	-
CDD	287	328	-	cd16479	-
PANTHER	3	336	HRD1 family E3 ubiquitin-protein ligases	PTHR22763	IPR050731 [Display all genes with this domain]
Pfam	289	328	Zinc finger, RING-type	PF13639	IPR001841 [Display all genes with this domain]
SMART	290	327	Zinc finger, RING-type	SM00184	IPR001841 [Display all genes with this domain]
PROSITE profiles	290	328	Zinc finger, RING-type	PS50089	IPR001841 [Display all genes with this domain]
Gene3D	262	338	Zinc finger, RING/FYVE/PHD-type	3.30.40.10	IPR013083 [Display all genes with this domain]

Other features

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Feature type
Start
End

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Filter

Feature type	Start	End
MobiDBLite	347	371
MobiDBLite	401	427
MobiDBLite	401	434
Seg	104	120
Seg	376	382
TMHMM	7	24
TMHMM	34	56
TMHMM	99	121
TMHMM	141	160
TMHMM	173	195
TMHMM	222	244
Alphafold	1	495
Alphafold	1	495

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