Summary
Sequence
Protein Information
- Protein summary
- Domains & features
- Variants
- PDB 3D protein model
- AlphaFold predicted model
Genetic Variation
- Variant table
- Variant image
- Population comparison
- Comparison image
External References
- General identifiers
- Oligo probes
Supporting evidence
ID History
- Transcript history
- Protein history

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Ensembl Plants is produced in collaboration with Gramene

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Transcript: ORUFI06G06590.1

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Location

Chromosome 6: 4,558,976-4,564,020 reverse strand.

About this transcript

This transcript has 7 exons, is annotated with 14 domains and features and maps to 50 oligo probes.

Gene

This transcript is a product of gene ORUFI06G06590 Show transcript tableHide transcript table

Name	Transcript ID	bp	Protein	Biotype	UniProt	Flags
-	ORUFI06G06590.2	2121	542aa	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A0E0PUQ5	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical,
-	ORUFI06G06590.1	2088	542aa	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A0E0PUQ5	-
-	ORUFI06G06590.3	1629	542aa	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A0E0PUQ5	-
-	ORUFI06G06590.4	1596	531aa	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A0E0PUQ6	-

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Domains & features

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Domains

Original project that identified the domainDomain source	Start	End	Description	Accession	InterPro
SMART	387	452	Domain of unknown function DUF1771	SM01162	IPR013899 [Display all genes with this domain]
Pfam	388	451	Domain of unknown function DUF1771	PF08590	IPR013899 [Display all genes with this domain]
Pfam	35	46	PAM2 motif	PF07145	IPR009818 [Display all genes with this domain]
PANTHER	20	541	PAM2-like motif domain-containing protein	PTHR46651	IPR053242 [Display all genes with this domain]
CDD	217	259	Polyadenylate-binding protein-interacting protein 5/6/7, CUE domain	cd14371	IPR041806 [Display all genes with this domain]
SMART	459	542	Smr domain	SM00463	IPR002625 [Display all genes with this domain]
PROSITE profiles	462	542	Smr domain	PS50828	IPR002625 [Display all genes with this domain]
Gene3D	435	541	Smr domain superfamily	3.30.1370.110	IPR036063 [Display all genes with this domain]
Superfamily	460	540	Smr domain superfamily	SSF160443	IPR036063 [Display all genes with this domain]

Other features

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Feature type
Start
End

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Feature type	Start	End
MobiDBLite	68	77
MobiDBLite	68	87
Seg	75	86
Seg	194	215
Alphafold	1	542

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