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Oryza rufipogon (OR_W1943)
Location
About this transcript

This transcript has 2 exons, is annotated with 14 domains and features and maps to 30 oligo probes.

Gene
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  • Name
  • Transcript ID
  • bp
  • Protein
  • Translation ID
  • Biotype
  • UniProt
  • Flags
NameTranscript IDbpProteinBiotypeUniProtFlags
-ORUFI06G03600.11692563aa
 
Protein coding
A0A0E0PTP4 Ensembl Canonical

Domains

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  • Domain source
  • Start
  • End
  • Description
  • Accession
  • InterPro
Domain sourceStartEndDescriptionAccessionInterPro
Gene3D2057-1.20.1280.50-
CDD2260-cd22140-
PANTHER60309-PTHR13318-
Superfamily73294-SSF52047-
Pfam2255F-box domainPF12937IPR001810 [Display all genes with this domain]
Superfamily856F-box-like domain superfamilySSF81383IPR036047 [Display all genes with this domain]
Gene3D58354Leucine-rich repeat domain superfamily3.80.10.10IPR032675 [Display all genes with this domain]
SMART99130Leucine-rich repeat, cysteine-containing subtypeSM00367IPR006553 [Display all genes with this domain]
SMART224249Leucine-rich repeat, cysteine-containing subtypeSM00367IPR006553 [Display all genes with this domain]
SMART250275Leucine-rich repeat, cysteine-containing subtypeSM00367IPR006553 [Display all genes with this domain]

Other features

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  • Feature type
  • Start
  • End
Feature typeStartEnd
Seg314
Seg2337
Seg5265
Alphafold1563