Summary
Sequence
Protein Information
- Protein summary
- Domains & features
- Variants
- PDB 3D protein model
- AlphaFold predicted model
Genetic Variation
- Variant table
- Variant image
- Population comparison
- Comparison image
External References
- General identifiers
- Oligo probes
Supporting evidence
ID History
- Transcript history
- Protein history

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Ensembl Plants is produced in collaboration with Gramene

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Transcript: ORUFI01G36440.1

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Location

Chromosome 1: 30,538,880-30,542,241 forward strand.

About this transcript

This transcript has 5 exons, is annotated with 24 domains and features and maps to 52 oligo probes.

Gene

This transcript is a product of gene ORUFI01G36440 Show transcript tableHide transcript table

Name	Transcript ID	bp	Protein	Biotype	UniProt	Flags
-	ORUFI01G36440.1	1792	198aa	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A0E0N3D4	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical,

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Domains & features

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Domains

Original project that identified the domainDomain source	Start	End	Description	Accession	InterPro
CDD	89	197	-	cd00503	-
NCBIFAM	91	188	Frataxin	TIGR03422	IPR017789 [Display all genes with this domain]
TIGRFAM	91	188	Frataxin	TIGR03422	IPR017789 [Display all genes with this domain]
PROSITE patterns	139	153	Frataxin conserved site	PS01344	IPR020895 [Display all genes with this domain]
PANTHER	12	198	Frataxin/CyaY	PTHR16821	IPR002908 [Display all genes with this domain]
Prints	87	105	Frataxin/CyaY	PR00904	IPR002908 [Display all genes with this domain]
PROSITE profiles	87	195	Frataxin/CyaY	PS50810	IPR002908 [Display all genes with this domain]
SMART	87	198	Frataxin/CyaY	SM01219	IPR002908 [Display all genes with this domain]
Pfam	88	194	Frataxin/CyaY	PF01491	IPR002908 [Display all genes with this domain]
NCBIFAM	89	196	Frataxin/CyaY	TIGR03421	IPR002908 [Display all genes with this domain]
TIGRFAM	89	196	Frataxin/CyaY	TIGR03421	IPR002908 [Display all genes with this domain]
Prints	125	140	Frataxin/CyaY	PR00904	IPR002908 [Display all genes with this domain]
Prints	140	155	Frataxin/CyaY	PR00904	IPR002908 [Display all genes with this domain]
Gene3D	80	198	Frataxin/CyaY superfamily	3.30.920.10	IPR036524 [Display all genes with this domain]
Superfamily	81	195	Frataxin/CyaY superfamily	SSF55387	IPR036524 [Display all genes with this domain]

Other features

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Feature type
Start
End

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Filter

Feature type	Start	End
Phobius	1	5
Phobius	1	18
Phobius	6	13
Phobius	14	18
Phobius	19	198
Seg	32	45
Seg	69	82
SignalP GRAM POSITIVE	1	41
Alphafold	1	198

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