Summary
Sequence
Protein Information
- Protein summary
- Domains & features
- Variants
- PDB 3D protein model
- AlphaFold predicted model
Genetic Variation
- Variant table
- Variant image
- Population comparison
- Comparison image
External References
- General identifiers
- Oligo probes
Supporting evidence
ID History
- Transcript history
- Protein history

Configure this page

Custom tracks

Share this page

Bookmark this page

Ensembl Plants is produced in collaboration with Gramene

.

Transcript: ORUFI01G05350.1

.

Location

Chromosome 1: 3,691,778-3,696,052 forward strand.

About this transcript

This transcript has 8 exons, is annotated with 15 domains and features and maps to 40 oligo probes.

Gene

This transcript is a product of gene ORUFI01G05350 Show transcript tableHide transcript table

Name	Transcript ID	bp	Protein	Biotype	UniProt	Flags
-	ORUFI01G05350.1	1705	437aa	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A0E0MS50	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical,
-	ORUFI01G05350.2	1597	401aa	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A0E0MS51	-

.

Domains & features

.

Domains

Original project that identified the domainDomain source	Start	End	Description	Accession	InterPro
SMART	20	109	-	SM01161	-
PANTHER	21	373	-	PTHR13681	-
Pfam	82	186	RecQ mediated genome instability protein 1, OB-fold domain	PF08585	IPR013894 [Display all genes with this domain]
Gene3D	61	193	RecQ mediated genome instability protein, N-terminal OB-fold domain superfamily	2.40.50.770	IPR042470 [Display all genes with this domain]

Other features

Show entries

Show/hide columns

Feature type
Start
End

Download what you see Download whole table

Filter

Feature type	Start	End
MobiDBLite	195	281
MobiDBLite	222	232
MobiDBLite	243	257
MobiDBLite	298	437
MobiDBLite	340	349
MobiDBLite	392	413
MobiDBLite	417	437
Seg	131	146
Seg	288	304
Seg	389	414
Alphafold	1	437

.

Personal Data