Summary
Sequence
Protein Information
- Protein summary
- Domains & features
- Variants
- PDB 3D protein model
- AlphaFold predicted model
Genetic Variation
- Variant table
- Variant image
- Population comparison
- Comparison image
External References
- General identifiers
- Oligo probes
Supporting evidence
ID History
- Transcript history
- Protein history

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Transcript: OPUNC11G05600.1

Description

HEAT repeat ;HECT-domain (ubiquitin-transferase) [Source:Projected from Arabidopsis thaliana (AT4G38600) TAIR;Acc:AT4G38600]

Location

About this transcript

This transcript has 18 exons, is annotated with 40 domains and features and maps to 60 oligo probes.

Gene

Name	Transcript ID	bp	Protein	Translation ID	Biotype	UniProt	Flags
-	OPUNC11G05600.1	5835	1758aa	OPUNC11G05600.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A0E0MDG3	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical,
-	OPUNC11G05600.2	2851	318aa	OPUNC11G05600.2	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A0E0MDG4	-

Summary

Statistics

Exons: 18, Coding exons: 17, Transcript length: 5,835 bps, Translation length: 1,758 residues

Version

OPUNC11G05600.1

Type

Protein coding

Annotation Method

Gene annotation by Oryza Genome Evolution project (OGE) through MAKER gene annotation pipeline.