Summary
Sequence
Protein Information
- Protein summary
- Domains & features
- Variants
- PDB 3D protein model
- AlphaFold predicted model
Genetic Variation
- Variant table
- Variant image
- Population comparison
- Comparison image
External References
- General identifiers
- Oligo probes
Supporting evidence
ID History
- Transcript history
- Protein history

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Transcript: OPUNC07G13900.4

Description

Regulator of nonsense transcripts 1 homolog [Source:Projected from Arabidopsis thaliana (AT5G47010) UniProtKB/Swiss-Prot;Acc:Q9FJR0]

Location

About this transcript

This transcript has 29 exons, is annotated with 22 domains and features and maps to 39 oligo probes.

Gene

Name	Transcript ID	bp	Protein	Translation ID	Biotype	UniProt	Flags
-	OPUNC07G13900.2	3557	1184aa	OPUNC07G13900.2	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A0E0LKW6	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical,
-	OPUNC07G13900.4	3480	1159aa	OPUNC07G13900.4	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A0E0LKW8	-
-	OPUNC07G13900.1	3443	1146aa	OPUNC07G13900.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A0E0LKW5	-
-	OPUNC07G13900.3	3378	1125aa	OPUNC07G13900.3	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A0E0LKW7	-

Summary

Statistics

Exons: 29, Coding exons: 29, Transcript length: 3,480 bps, Translation length: 1,159 residues

Version

OPUNC07G13900.4

Type

Protein coding

Annotation Method

Gene annotation by Oryza Genome Evolution project (OGE) through MAKER gene annotation pipeline.