Summary
Sequence
Protein Information
- Protein summary
- Domains & features
- Variants
- PDB 3D protein model
- AlphaFold predicted model
Genetic Variation
- Variant table
- Variant image
- Population comparison
- Comparison image
External References
- General identifiers
- Oligo probes
Supporting evidence
ID History
- Transcript history
- Protein history

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Transcript: OPUNC05G15950.1

Description

Histone deacetylase [Source:UniProtKB/TrEMBL;Acc:A0A0E0L324]

Location

About this transcript

This transcript has 6 exons, is annotated with 19 domains and features and maps to 4 oligo probes.

Gene

Name	Transcript ID	bp	Protein	Translation ID	Biotype	UniProt	Flags
-	OPUNC05G15950.1	2112	703aa	OPUNC05G15950.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A0E0L324	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical,
-	OPUNC05G15950.2	1542	513aa	OPUNC05G15950.2	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A0E0L325	-
-	OPUNC05G15950.3	894	297aa	OPUNC05G15950.3	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A0E0L326	-
-	OPUNC05G15950.4	827	274aa	OPUNC05G15950.4	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A0E0L327	-
-	OPUNC05G15950.5	771	256aa	OPUNC05G15950.5	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A0E0L328	-

Summary

Statistics

Exons: 6, Coding exons: 6, Transcript length: 2,112 bps, Translation length: 703 residues

Version

OPUNC05G15950.1

Type

Protein coding

Annotation Method

Gene annotation by Oryza Genome Evolution project (OGE) through MAKER gene annotation pipeline.